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Actin 3D structures

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(New page: == 3D Structures of Actin == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| * α actin 1 (Aa) **3hbt, [[2zwh...)
Current revision (10:34, 21 August 2022) (edit) (undo)
 
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== 3D Structures of Actin ==
+
== 3D Structures of [[Actin]] ==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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**[[3hbt]], [[2zwh]], [[1nwk]], [[1j6z]], [[3g37]], [[2y83]] – rAa – rabbit<br />
**[[3hbt]], [[2zwh]], [[1nwk]], [[1j6z]], [[3g37]], [[2y83]] – rAa – rabbit<br />
**[[2q1n]], [[2q31]], [[2a5x]], [[1rdw]], [[1rfq]], [[1lcu]] – rAa – dimer<br />
**[[2q1n]], [[2q31]], [[2a5x]], [[1rdw]], [[1rfq]], [[1lcu]] – rAa – dimer<br />
-
**[[3mfp]], [[4a7n]], [[3jbj]], [[6bnu]] – rAa + ADP – Cryo EM<br />
 
**[[2hmp]] – rAa – protease cleaved<br />
**[[2hmp]] – rAa – protease cleaved<br />
**[[2zwh]], [[2gwj]], [[2gwk]] – rAa-ATP<br />
**[[2zwh]], [[2gwj]], [[2gwk]] – rAa-ATP<br />
-
**[[3j8i]], [[3j8j]], [[3j8k]], [[6bno]], [[6avb]], [[6av9]], [[5mvy]], [[5mva]], [[6fhl]], [[5oof]], [[5ooe]], [[5ood]], [[5ooc]], [[5onv]] – rAa + ADP – Cryo EM<br />
 
**[[3b5u]] – rAa filament – fiber diffraction<br />
**[[3b5u]] – rAa filament – fiber diffraction<br />
* α actin 1 complex with gelsolin
* α actin 1 complex with gelsolin
-
**[[1mdu]] – cAa+hGelsolin - chicken<br />
 
**[[2ff3]] - rAa+ hGelsolin +domains of hWASP <br />
**[[2ff3]] - rAa+ hGelsolin +domains of hWASP <br />
**[[1eqy]], [[3cjb]], [[1p8z]], [[3ffk]], [[3tu5]], [[4pkg]], [[4pkh]], [[4pki]] – rAa+hGelsolin<br />
**[[1eqy]], [[3cjb]], [[1p8z]], [[3ffk]], [[3tu5]], [[4pkg]], [[4pkh]], [[4pki]] – rAa+hGelsolin<br />
Line 23: Line 20:
**[[4z94]] - rAa+hGelsolin/tropomodulin/leiomodin<br />
**[[4z94]] - rAa+hGelsolin/tropomodulin/leiomodin<br />
**[[2ff6]] - rAa+DmCiboulot+hGelsolin <br />
**[[2ff6]] - rAa+DmCiboulot+hGelsolin <br />
 +
**[[7c2f]], [[7c2g]], [[7c2h]] - rAa+ Gelsolin <br />
 +
**[[1mdu]] – cAa+hGelsolin - chicken<br />
**[[4cbu]], [[5mvv]] – PfAa + gelsolin – ''Plasmodium falciparum''<br />
**[[4cbu]], [[5mvv]] – PfAa + gelsolin – ''Plasmodium falciparum''<br />
**[[4cbw]] – PbAa + gelsolin – ''Plasmodium berghei''<br />
**[[4cbw]] – PbAa + gelsolin – ''Plasmodium berghei''<br />
Line 34: Line 33:
**[[1wua]] – rAa+alpyronine A<br />
**[[1wua]] – rAa+alpyronine A<br />
**[[4k41]], [[1qz6]], [[1s22]], [[4k42]], [[4k43]], [[2asm]], [[2asp]], [[2aso]], [[1yxq]], [[1s22]], [[3m6g]], [[6mgo]] - rAa+ macrolide<br />
**[[4k41]], [[1qz6]], [[1s22]], [[4k42]], [[4k43]], [[2asm]], [[2asp]], [[2aso]], [[1yxq]], [[1s22]], [[3m6g]], [[6mgo]] - rAa+ macrolide<br />
-
**[[1qz6]] – rAa+jaspisamide A<br />
+
**[[1qz6]] – rAa+jaspisamide derivative<br />
 +
**[[7ahn]], [[7ahq]] – rAa+jaspisamide derivative + ADP<br />
 +
**[[6qri]] – rAa+ chivosazole<br />
 +
**[[3mfp]], [[4a7n]], [[3jbj]], [[6bnu]], [[3j8i]], [[3j8j]], [[3j8k]], [[6bno]], [[6avb]], [[6av9]], [[5mvy]], [[5mva]], [[6fhl]], [[5oof]], [[5ooe]], [[5ood]], [[5ooc]], [[5onv]], [[6t23]], [[6t24]], [[6vau]] – rAa + ADP – Cryo EM<br />
 +
**[[7z7i]] – rAa + ADP + ADP-ribose – Cryo EM<br />
 +
**[[7pm3]] – rAa + ADP + JASP – Cryo EM<br />
 +
**[[6kll]], [[6kln]] – mAa + ADP – mouse - Cryo EM <br />
 +
**[[6djm]] – cAa + AMPPNP - Cryo EM <br />
 +
**[[6djn]], [[6djo]], [[7bt7]], [[7k20]], [[7k21]], [[7r8v]] – cAa + ADP - Cryo EM <br />
 +
**[[7k20]], [[7k21]] – cAa + ADP + pyrene - Cryo EM <br />
 +
**[[6iug]] – Aa + ADP – maize - Cryo EM <br />
**[[5ogw]] – PfAa + jasplakinolide + ADP – Cryo EM <br />
**[[5ogw]] – PfAa + jasplakinolide + ADP – Cryo EM <br />
**[[6bqw]] – Aa + AMPPNP – ''Bacillus subtilis'' - Cryo EM <br />
**[[6bqw]] – Aa + AMPPNP – ''Bacillus subtilis'' - Cryo EM <br />
 +
**[[7q8b]], [[7q8c]] - LmAa + ADP – ''Leishmania major'' - Cryo EM<br />
-
* α actin 1 complex with protein
+
* α actin 1 binary complex with protein
**[[6fm2]] – hAa + adenylyl cyclase-asociated protein <br />
**[[6fm2]] – hAa + adenylyl cyclase-asociated protein <br />
-
**[[2w49]] – cAa +troponin C+ troponin T+ troponin I+ tropomyosin α-1 <br />
+
**[[7lrg]] - pAa + MYBP-C – Cryo EM<br />
-
**[[3j4k]] - cAa + tropomyosin<br />
+
-
**[[6d8c]] - cAa + filamin + phalloidin – Cryo EM<br />
+
-
**[[5yu8]] – cAa + cofilin 2<br />
+
**[[3j8a]] - mAa + tropomyosin - mouse<br />
**[[3j8a]] - mAa + tropomyosin - mouse<br />
-
**[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM<br />
+
**[[6bnw]], [[6bnp]], [[6bih]] - rAa + myosin – Cryo EM<br />
-
**[[5jlf]], [[3j8a]] – rAa + tropomyosin alpha-1 + ADP – Cryo EM<br />
+
-
**[[6c1h]], [[6c1g]], [[6c1d]] - rAa + myosin + calmodulin<br />
+
-
**[[6bnv]] - rAa + myosin + calmodulin – Cryo EM<br />
+
-
**[[6bnw]], [[6bnp]] - rAa + myosin – Cryo EM<br />
+
-
**[[6bnq]], [[6blh]] - rAa + myosin + ADP – Cryo EM<br />
+
**[[2v51]], [[2v52]], [[2yje]], [[2yjf]] – rAa+mMKL/Myocardin-like protein <br />
**[[2v51]], [[2v52]], [[2yje]], [[2yjf]] – rAa+mMKL/Myocardin-like protein <br />
**[[2vcp]] – rAa+ neural wiskott-aldrich syndrome protein (hWASP) – human (h)<br />
**[[2vcp]] – rAa+ neural wiskott-aldrich syndrome protein (hWASP) – human (h)<br />
-
**[[2a3z]], [[2a40]], [[2a41]] – rAa+cDNase I+domains of hWASP – cow (c)<br />
+
**[[2a3z]], [[2a40]], [[2a41]] – rAa+bDNase I+domains of hWASP – bovine<br />
**[[2a42]] – rAa+cDNase I<br />
**[[2a42]] – rAa+cDNase I<br />
 +
**[[6wvt]] – rAa+ catenin<br />
**[[4eah]] – rAa + formin-like protein 3 FH2 domain<br />
**[[4eah]] – rAa + formin-like protein 3 FH2 domain<br />
**[[3daw]] – rAa+mTwinfilin-1<br />
**[[3daw]] – rAa+mTwinfilin-1<br />
Line 62: Line 65:
**[[4pl8]] - rAa+ Thymosin β-4<br />
**[[4pl8]] - rAa+ Thymosin β-4<br />
**[[3u8x]] - rAa+DmThymosin β-4 - ''Drosophila melanogaster''<br />
**[[3u8x]] - rAa+DmThymosin β-4 - ''Drosophila melanogaster''<br />
-
**[[1esv]] - rAa+hGelsolin+ latrunculin A<br />
 
-
**[[3cjc]] - rAa+hGelsolin+cDNase I<br />
 
-
**[[2d1k]] - rAa+hWH2 domain of MIN+cDNase I<br />
 
**[[2pbd]], [[5zzb]], [[5zza]], [[5yee]] – rAa+hProfilin-1<br />
**[[2pbd]], [[5zzb]], [[5zza]], [[5yee]] – rAa+hProfilin-1<br />
-
**[[2pav]] - rAa+hProfilin-1+hVASP<br />
 
**[[2q97]] – rAa+toxofilin – ''Toxoplasma gondii''<br />
**[[2q97]] – rAa+toxofilin – ''Toxoplasma gondii''<br />
**[[2q0r]] – rAa+pectenotoxin-2<br />
**[[2q0r]] – rAa+pectenotoxin-2<br />
-
**[[2q0u]] - rAa+pectenotoxin-2+latrunculin B<br />
 
**[[1y64]] – rAa+yBNI1 domain FH2 - yeast<br />
**[[1y64]] – rAa+yBNI1 domain FH2 - yeast<br />
**[[1sqk]] – rAa+DmCiboulot <br />
**[[1sqk]] – rAa+DmCiboulot <br />
Line 81: Line 79:
**[[4gy2]] – rAa + ι toxin component IA <br />
**[[4gy2]] – rAa + ι toxin component IA <br />
**[[3jbi]] – rAa + vinculin - CryoEM <br />
**[[3jbi]] – rAa + vinculin - CryoEM <br />
-
**[[3jbk]] – rAa + metavinculin + ADP - CryoEM <br />
 
**[[4wyb]] – rAa + BUD6 <br />
**[[4wyb]] – rAa + BUD6 <br />
 +
**[[5ypu]] – rAa + protein cordon-bleu WH2 domain<br />
 +
**[[6jbk]], [[6jcu]], [[6jh8]], [[6jh9]] – rAa + protein cordon-bleu peptide<br />
 +
**[[6gvc]] – rAa + Rho GTPase-activating protein <br />
 +
**[[7kch]], [[7r91]], [[7rb8]], [[7rb9]] - cAa + myosin – Cryo EM<br />
 +
**[[3j4k]] - cAa + tropomyosin<br />
 +
**[[5yu8]] – cAa + cofilin 2<br />
 +
**[[5ce3]], [[4ci6]] – Aa + protein kinase YopO – fall armyworm <br />
 +
**[[6i4d]] – PfAa + mGelsolin<br />
 +
 +
* α actin 1 higher complex with protein
 +
 +
**[[5nol]], [[5noj]], [[5nog]] – pAa + tropomyosin alpha-1 + ADP – pig - Cryo EM<br />
 +
**[[7jh7]] – pAa in actomyosin complex – Cryo EM <br />
 +
**[[7ko4]], [[7ko5]], [[7ko7]], [[7kon]], [[7kor]] – pAa in thin filament – Cryo EM<br />
 +
**[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM<br />
 +
**[[5jlf]], [[3j8a]] – rAa + tropomyosin alpha-1 + ADP – Cryo EM<br />
 +
**[[6kn7]], [[6kn8]] – rAa in thin filament + ADP – Cryo EM<br />
 +
**[[6c1h]], [[6c1g]], [[6c1d]] - rAa + myosin + calmodulin<br />
 +
**[[6bnv]] - rAa + myosin + calmodulin – Cryo EM<br />
 +
**[[6bnq]], [[6blh]] - rAa + myosin + ADP – Cryo EM<br />
 +
**[[6yp9]] – rAa+mTwinfilin-1 + ATP<br />
 +
**[[6rsw]], [[7ccc]] – rAa + mTwinfilin-1 + CAP-1 + ADP<br />
 +
**[[6vec]] – rAa + LCP1 + ADP – Cryo EM<br />
 +
**[[1esv]] - rAa+hGelsolin+ latrunculin A<br />
 +
**[[3cjc]] - rAa+hGelsolin+cDNase I<br />
 +
**[[2d1k]] - rAa+hWH2 domain of MIN+cDNase I<br />
 +
**[[7nxv]] – rAa + bDNase I + protein phosphatase<br />
 +
**[[6nas]], [[6nbe]], [[6nbw]] – rAa + hProfilin-1 + acetyltransferase + acetyl CoA + ATP<br />
 +
**[[2pav]] - rAa+hProfilin-1+hVASP<br />
 +
**[[2q0u]] - rAa+pectenotoxin-2+latrunculin B<br /> />
 +
**[[3jbk]] – rAa + metavinculin + ADP - CryoEM <br />
 +
**[[6t1y]], [[6t20]], [[6t25]], [[6u96]] – rAa + phalloidin + ADP - CryoEM <br />
 +
**[[7ad9]] – rAa + phalloidin + lifeact + ADP - CryoEM <br />
 +
**[[7p1g]] – rAa + phalloidin + ExoY + ADP - CryoEM <br />
 +
**[[7tpt]] – rAa in ARP2/3 complex – Cryo EM <br />
 +
**[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] [[7ply]], [[7plz]], [[7pm0]], [[7pm1]], [[7pm2]], [[7plt]], [[7plu]], [[7plv]], [[7plw]], [[7plx]], [[7pm5]], [[7pm6]], [[7pm7]], [[7pm8]], [[7pm9]], [[7pma]], [[7pmb]], [[7pmc]], [[7pmd]], [[7pme]], [[7pmf]], [[7pmg]], [[7pmh]], [[7pmi]], [[7pmj]], [[7pml]] – rAa in actomyosin complex – Cryo EM <br />
**[[4v0u]] – rAa + protein phosphatase 1 +serine/threonine protein phosphatase <br />
**[[4v0u]] – rAa + protein phosphatase 1 +serine/threonine protein phosphatase <br />
**[[4h0t]] – rAa + ι toxin component IA + ADPR<br />
**[[4h0t]] – rAa + ι toxin component IA + ADPR<br />
**[[4h03]], [[4h0v]], [[4h0x]], [[4h0y]] – rAa + ι toxin component IA + NAD<br />
**[[4h03]], [[4h0v]], [[4h0x]], [[4h0y]] – rAa + ι toxin component IA + NAD<br />
-
**[[5ypu]] – rAa + protein cordon-bleu WH2 domain<br />
+
**[[6uby]], [[6uc0]], [[6uc4]], [[6vao]] – rAa + cofilin 1 + ADP – Cryo EM<br />
 +
**[[7z7h]] – rAa + TccC3 + ADP + ADP-ribose – Cryo EM<br />
 +
**[[7nep]], [[7qin]] – mAa in actomyosin complex – Cryo EM <br />
 +
**[[7aqk]] – mAa in ARP2/3 complex – Cryo EM <br /
 +
**[[2w49]] – cAa in thin filament <br />
 +
**[[6x5z]] - cAa in actomyosin complex – Cryo EM<br />
 +
**[[7bti]] - cAa + phalloidin + ADP – Cryo EM<br />
 +
**[[6d8c]] - cAa + filamin + phalloidin – Cryo EM<br />
 +
**[[7r94]] - cAa + plastin-3 + ADP – Cryo EM<br />
 +
**[[6m5g]] - cAa + utrophin + ADP – Cryo EM<br />
 +
**[[7bte]] - cAa + lifeact + ADP – Cryo EM<br />
 +
**[[6upw]] – cAa + metavinculin + ADP - CryoEM <br />
 +
**[[6upv]] – cAa+ catenin + ADP – Cryo EM<br />
 +
**[[7udt]], [[7udu]] - cAa + myosin + regulatory light chain + ADP – Cryo EM<br />
**[[5i9e]] – yAa + actin-related protein 4 + helicase <br />
**[[5i9e]] – yAa + actin-related protein 4 + helicase <br />
-
**[[5ce3]], [[4ci6]] – Aa + protein kinase YopO – fall armyworm <br />
+
**[[6i4e]], [[6i4m]] – PfAa + mGelsolin + ADP<br />
-
**[[5nol]], [[5noj]], [[5nog]] – Aa + tropomyosin alpha-1 + ADP – pig - Cryo EM<br />
+
**[[6i4i]], [[6i4j]] – PfAa (mutant) + mGelsolin + ADP<br />
 +
**[[6i4f]], [[6i4l]] – PfAa (mutant) + mGelsolin + ATP + ADP<br />
 +
**[[6i4g]], [[6i4h]], [[6i4k]] – PfAa (mutant) + mGelsolin + ATP <br />
 +
**[[6tu7]] - PfAa + myosin + ADP – Cryo EM<br />
 +
**[[7q8s]] - LmAa + cofilin + ADP - Cryo EM<br />
* β actin (Ab)
* β actin (Ab)
Line 97: Line 147:
**[[3j82]] – hAb + DNGR-1 - CryoEM <br />
**[[3j82]] – hAb + DNGR-1 - CryoEM <br />
**[[6anu]] – hAb + spectrin – Cryo EM <br />
**[[6anu]] – hAb + spectrin – Cryo EM <br />
 +
**[[7p1h]] – hAb (mutant) + profilin + MMBP – Cryo EM <br />
 +
**[[6znl]] – pAb in dynactin complex – Cryo EM <br />
 +
**[[3u4l]], [[3ub5]] – Ab + profilin-1 - bovine<br />
 +
**[[7pdz]] – bAb + phalloidin + F-actin-capping protein – Cryo EM <br />
**[[2oan]] – cAb<br />
**[[2oan]] – cAb<br />
**[[3j0s]] – cAb + cofilin 2<br />
**[[3j0s]] – cAb + cofilin 2<br />
-
**[[3u4l]], [[3ub5]] – Ab + profilin-1 - bovine<br />
 
**[[4cbx]] – PbAb + gelsolin <br />
**[[4cbx]] – PbAb + gelsolin <br />
Line 107: Line 160:
**[[5jlh]], [[6g2t]], [[6cxj]], [[6cxi]] – hAg + myosin-14 + tropomyosin alpha-3 – Cryo-EM <br />
**[[5jlh]], [[6g2t]], [[6cxj]], [[6cxi]] – hAg + myosin-14 + tropomyosin alpha-3 – Cryo-EM <br />
**[[1atn]] – rAg+cDNase I<br />
**[[1atn]] – rAg+cDNase I<br />
 +
**[[1hlu]], [[2btf]] – cAg+cProfilin<br />
 +
**[[1o1g]], [[1o1a]], [[1o1b]], [[1o1c]], [[1o1d]], [[1o1e]], [[1o1f]], [[1o18]], [[1o19]], [[1mvw]], [[1m8q]] – cAg+cMyosin II - tomography<br />
 +
**[[3w3d]] – cAg + DNase I<br />
**[[3chw]] – Major DdAg+hProfilin+poly-Pro repeat – ''Dictyostelium discoideum''<br />
**[[3chw]] – Major DdAg+hProfilin+poly-Pro repeat – ''Dictyostelium discoideum''<br />
**[[3ci5]], [[3cip]], [[1nmd]] - Major DdAg+hGelsolin<br />
**[[3ci5]], [[3cip]], [[1nmd]] - Major DdAg+hGelsolin<br />
Line 113: Line 169:
**[[1nm1]] - DdAg+hGelsolin+Mg-ATP<br />
**[[1nm1]] - DdAg+hGelsolin+Mg-ATP<br />
**[[1nlv]], [[1c0f]] – DdAg+hGelsolin<br />
**[[1nlv]], [[1c0f]] – DdAg+hGelsolin<br />
-
**[[1hlu]], [[2btf]] – cAg+cProfilin<br />
 
-
**[[1o1g]], [[1o1a]], [[1o1b]], [[1o1c]], [[1o1d]], [[1o1e]], [[1o1f]], [[1o18]], [[1o19]], [[1mvw]], [[1m8q]] –cAg+cMyosin II - tomography<br />
 
-
**[[3w3d]] – cAg + DNase I<br />
 
**[[1yvn]] – yA (mutant)+hGelsolin <br />
**[[1yvn]] – yA (mutant)+hGelsolin <br />
**[[1yag]] - yA+hGelsolin<br />
**[[1yag]] - yA+hGelsolin<br />
Line 133: Line 186:
**[[4efh]] – A + spire domains C,D – ''Acanthamoeba castellanii''
**[[4efh]] – A + spire domains C,D – ''Acanthamoeba castellanii''
}}
}}
 +
[[Category: Topic Page]]

Current revision

3D Structures of Actin

Updated on 21-August-2022

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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