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4bdu

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[[Image:4bdu.jpg|left|200px]]
 
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{{STRUCTURE_4bdu| PDB=4bdu | SCENE= }}
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==Bax BH3-in-Groove dimer (GFP)==
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<StructureSection load='4bdu' size='340' side='right'caption='[[4bdu]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4bdu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BDU FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4bd2|4bd2]], [[4bd6|4bd6]], [[4bd7|4bd7]], [[4bd8|4bd8]]</div></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bdu OCA], [https://pdbe.org/4bdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bdu RCSB], [https://www.ebi.ac.uk/pdbsum/4bdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bdu ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In stressed cells, apoptosis ensues when Bcl-2 family members Bax or Bak oligomerize and permeabilize the mitochondrial outer membrane. Certain BH3-only relatives can directly activate them to mediate this pivotal, poorly understood step. To clarify the conformational changes that induce Bax oligomerization, we determined crystal structures of BaxDeltaC21 treated with detergents and BH3 peptides. The peptides bound the Bax canonical surface groove but, unlike their complexes with prosurvival relatives, dissociated Bax into two domains. The structures define the sequence signature of activator BH3 domains and reveal how they can activate Bax via its groove by favoring release of its BH3 domain. Furthermore, Bax helices alpha2-alpha5 alone adopted a symmetric homodimer structure, supporting the proposal that two Bax molecules insert their BH3 domain into each other's surface groove to nucleate oligomerization. A planar lipophilic surface on this homodimer may engage the membrane. Our results thus define critical Bax transitions toward apoptosis.
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===Bax BH3-in-Groove dimer (GFP)===
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Bax Crystal Structures Reveal How BH3 Domains Activate Bax and Nucleate Its Oligomerization to Induce Apoptosis.,Czabotar PE, Westphal D, Dewson G, Ma S, Hockings C, Fairlie WD, Lee EF, Yao S, Robin AY, Smith BJ, Huang DC, Kluck RM, Adams JM, Colman PM Cell. 2013 Jan 31;152(3):519-31. doi: 10.1016/j.cell.2012.12.031. PMID:23374347<ref>PMID:23374347</ref>
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{{ABSTRACT_PUBMED_23374347}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4bdu" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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[[4bdu]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BDU OCA].
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*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
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[[Category: Colman, P M.]]
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== References ==
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[[Category: Czabotar, P E.]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Aeqvi]]
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[[Category: Large Structures]]
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[[Category: Colman, P M]]
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[[Category: Czabotar, P E]]
[[Category: Apoptosis]]
[[Category: Apoptosis]]
[[Category: Bcl-2 family]]
[[Category: Bcl-2 family]]
[[Category: Chimera]]
[[Category: Chimera]]
[[Category: Programmed cell death]]
[[Category: Programmed cell death]]

Current revision

Bax BH3-in-Groove dimer (GFP)

PDB ID 4bdu

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