This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4h5s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:43, 31 August 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Complex structure of Necl-2 and CRTAM==
==Complex structure of Necl-2 and CRTAM==
-
<StructureSection load='4h5s' size='340' side='right' caption='[[4h5s]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='4h5s' size='340' side='right'caption='[[4h5s]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4h5s]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H5S OCA]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H5S FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CRTAM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), CADM1, IGSF4, IGSF4A, NECL2, SYNCAM, TSLC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h5s OCA], [https://pdbe.org/4h5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h5s RCSB], [https://www.ebi.ac.uk/pdbsum/4h5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h5s ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+
</table>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h5s OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4h5s RCSB], [http://www.ebi.ac.uk/pdbsum/4h5s PDBsum]</span></td></tr>
+
-
<table>
+
-
<div style="background-color:#fffaf0;">
+
-
== Publication Abstract from PubMed ==
+
-
Nectin and nectin-like proteins are cell adhesion molecules that mediate the formation of cell adherens junctions by forming homo- or heterodimers. Some members of this protein family can also be used by immune receptors to mediate immune recognition. For instance, nectin-like 2 (Necl-2) is used as a ligand for the immune system by interaction with the immune receptor CRTAM (class-I MHC-restricted T cell associated molecule), which is mainly expressed on the surface of cytotoxic lymphocyte cells. However, the Necl-2/CRTAM binding mode and its relationship to cell adhesion are not known. Here, we report a Necl-2/CRTAM complex structure, demonstrating that Necl-2 binding to CRTAM competes with the dimerization of CRTAM and possibly Necl-2. Necl-2 occupies the CRTAM homodimer interface, making homodimerization impossible. Mutational and functional analyses identified key amino acids (double "lock-and-key") responsible for the binding. Our work illustrates how the cell adhesion molecule Necl-2 competitively binds the immune receptor CRTAM.
+
-
 
+
-
Competition of Cell Adhesion and Immune Recognition: Insights into the Interaction between CRTAM and Nectin-like 2.,Zhang S, Lu G, Qi J, Li Y, Zhang Z, Zhang B, Fan Z, Yan J, Gao GF Structure. 2013 Jul 16. pii: S0969-2126(13)00207-4. doi:, 10.1016/j.str.2013.06.006. PMID:23871486<ref>PMID:23871486</ref>
+
-
 
+
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Large Structures]]
-
[[Category: Gao, G F.]]
+
[[Category: Gao GF]]
-
[[Category: Li, Y.]]
+
[[Category: Li Y]]
-
[[Category: Lu, G.]]
+
[[Category: Lu G]]
-
[[Category: Qi, J.]]
+
[[Category: Qi J]]
-
[[Category: Yan, J.]]
+
[[Category: Yan J]]
-
[[Category: Zhang, B.]]
+
[[Category: Zhang B]]
-
[[Category: Zhang, S.]]
+
[[Category: Zhang S]]
-
[[Category: Zhang, Z.]]
+
[[Category: Zhang Z]]
-
[[Category: Cell adhesion]]
+
-
[[Category: Ig fold]]
+
-
[[Category: Immune recognition]]
+

Current revision

Complex structure of Necl-2 and CRTAM

PDB ID 4h5s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools