4bsd
From Proteopedia
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<StructureSection load='4bsd' size='340' side='right'caption='[[4bsd]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='4bsd' size='340' side='right'caption='[[4bsd]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4bsd]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4bsd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BSD FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900067:3-sialyl-N-acetyllactosamine'>PRD_900067</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bsd OCA], [https://pdbe.org/4bsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bsd RCSB], [https://www.ebi.ac.uk/pdbsum/4bsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bsd ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/M4YV75_9INFA M4YV75_9INFA]] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[RuleBase:RU003324] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore (By similarity).[SAAS:SAAS00204388] |
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==See Also== | ==See Also== | ||
- | *[[Hemagglutinin|Hemagglutinin]] | + | *[[Hemagglutinin 3D structures|Hemagglutinin 3D structures]] |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Influenza A virus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Bennett | + | [[Category: Bennett MS]] |
- | [[Category: Collins | + | [[Category: Collins PJ]] |
- | [[Category: Daniels | + | [[Category: Daniels RS]] |
- | [[Category: Gamblin | + | [[Category: Gamblin SJ]] |
- | [[Category: Haire | + | [[Category: Haire LF]] |
- | [[Category: Martin | + | [[Category: Martin SR]] |
- | [[Category: McCauley | + | [[Category: McCauley JW]] |
- | [[Category: Skehel | + | [[Category: Skehel JJ]] |
- | [[Category: Walker | + | [[Category: Walker PA]] |
- | [[Category: Wharton | + | [[Category: Wharton SA]] |
- | [[Category: Xiong | + | [[Category: Xiong X]] |
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Revision as of 17:04, 7 September 2022
Human H7N9 Influenza Virus Haemagglutinin (with Asn-133 Glycosylation) in Complex with Avian Receptor Analogue 3'-SLN
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Categories: Influenza A virus | Large Structures | Bennett MS | Collins PJ | Daniels RS | Gamblin SJ | Haire LF | Martin SR | McCauley JW | Skehel JJ | Walker PA | Wharton SA | Xiong X