This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
8dpd
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==superfolder GFP Tyr74pCNPhe mutant== | ==superfolder GFP Tyr74pCNPhe mutant== | ||
| - | <StructureSection load='8dpd' size='340' side='right'caption='[[8dpd]]' scene=''> | + | <StructureSection load='8dpd' size='340' side='right'caption='[[8dpd]], [[Resolution|resolution]] 1.51Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DPD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[8dpd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8DPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8DPD FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dpd OCA], [https://pdbe.org/8dpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dpd RCSB], [https://www.ebi.ac.uk/pdbsum/8dpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dpd ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4CF:4-CYANO-L-PHENYLALANINE'>4CF</scene>, <scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8dpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8dpd OCA], [https://pdbe.org/8dpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8dpd RCSB], [https://www.ebi.ac.uk/pdbsum/8dpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8dpd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin. | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Aequorea victoria]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Papoutsis B]] | [[Category: Papoutsis B]] | ||
[[Category: Phillips-Piro CM]] | [[Category: Phillips-Piro CM]] | ||
[[Category: Piacentini J]] | [[Category: Piacentini J]] | ||
Revision as of 19:41, 7 September 2022
superfolder GFP Tyr74pCNPhe mutant
| |||||||||||
