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4cwe

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Revision as of 07:35, 14 September 2022

Structural studies of rolling circle replication initiation protein from Staphylococcus aureus

Structural highlights

4cwe is a 2 chain structure with sequence from Staphylococcus aureus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[REPN_STAAU] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.[REPD_STAAU] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.

Publication Abstract from PubMed

Antibiotic resistance in pathogenic bacteria is a continual threat to human health, often residing in extrachromosomal plasmid DNA. Plasmids of the pT181 family are widespread and confer various antibiotic resistances to Staphylococcus aureus. They replicate via a rolling circle mechanism that requires a multi-functional, plasmid-encoded replication protein to initiate replication, recruit a helicase to the site of initiation and terminate replication after DNA synthesis is complete. We present the first atomic resolution structures of three such replication proteins that reveal distinct, functionally relevant conformations. The proteins possess a unique active site and have been shown to contain a catalytically essential metal ion that is bound in a manner distinct from that of any other rolling circle replication proteins. These structures are the first examples of the Rep_trans Pfam family providing insights into the replication of numerous antibiotic resistance plasmids from Gram-positive bacteria, Gram-negative phage and the mobilisation of DNA by conjugative transposons.

Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication.,Carr SB, Phillips SE, Thomas CD Nucleic Acids Res. 2016 Jan 20. pii: gkv1539. PMID:26792891^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Carr SB, Phillips SE, Thomas CD. Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication. Nucleic Acids Res. 2016 Jan 20. pii: gkv1539. PMID:26792891 doi:http://dx.doi.org/10.1093/nar/gkv1539

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4cwe"

Categories: Large Structures | Staphylococcus aureus | Carr SB | Phillips SEV | Thomas CD

@@ Line 3: / Line 3: @@
 <StructureSection load='4cwe' size='340' side='right'caption='[[4cwe]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4cwe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CWE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CWE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4cwe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CWE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CWE FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4cwc|4cwc]]</td></tr>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cwe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cwe OCA], [https://pdbe.org/4cwe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cwe RCSB], [https://www.ebi.ac.uk/pdbsum/4cwe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cwe ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_topoisomerase DNA topoisomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.99.1.2 5.99.1.2] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cwe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cwe OCA], [http://pdbe.org/4cwe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4cwe RCSB], [http://www.ebi.ac.uk/pdbsum/4cwe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4cwe ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/REPD_STAAU REPD_STAAU]] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.
+[[https://www.uniprot.org/uniprot/REPN_STAAU REPN_STAAU]] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.[[https://www.uniprot.org/uniprot/REPD_STAAU REPD_STAAU]] This protein is probably a specific topoisomerase involved in initiating replication. This protein is specifically required and may be rate-limiting for replication of the plasmid in vivo.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 23: / Line 21: @@
 __TOC__
 </StructureSection>
-[[Category: DNA topoisomerase]]
 [[Category: Large Structures]]
-[[Category: Carr, S B]]
+[[Category: Staphylococcus aureus]]
-[[Category: Phillips, S E.V]]
+[[Category: Carr SB]]
-[[Category: Thomas, C D]]
+[[Category: Phillips SEV]]
-[[Category: Antibiotic resistance]]
+[[Category: Thomas CD]]
-[[Category: Chimera]]
-[[Category: Dna relaxase]]
-[[Category: Isomerase]]
-[[Category: Pcra helicase]]

4cwe

From Proteopedia

Revision as of 07:35, 14 September 2022

Structural studies of rolling circle replication initiation protein from Staphylococcus aureus

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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