This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4d05

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:40, 14 September 2022) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='4d05' size='340' side='right'caption='[[4d05]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='4d05' size='340' side='right'caption='[[4d05]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4d05]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Psychromonas_sp._sp041 Psychromonas sp. sp041]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D05 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D05 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4d05]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psychromonas_sp._SP041 Psychromonas sp. SP041]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D05 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D05 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d05 OCA], [https://pdbe.org/4d05 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d05 RCSB], [https://www.ebi.ac.uk/pdbsum/4d05 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d05 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d05 OCA], [http://pdbe.org/4d05 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d05 RCSB], [http://www.ebi.ac.uk/pdbsum/4d05 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d05 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/A0A0A6YVN6_9GAMM A0A0A6YVN6_9GAMM]]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Psychromonas sp. sp041]]
+
[[Category: Psychromonas sp. SP041]]
-
[[Category: Leiros, H K.S]]
+
[[Category: Leiros H-KS]]
-
[[Category: Rothweiler, U]]
+
[[Category: Rothweiler U]]
-
[[Category: Williamson, A]]
+
[[Category: Williamson A]]
-
[[Category: Ligase]]
+

Current revision

Structure and activity of a minimal-type ATP-dependent DNA ligase from a psychrotolerant bacterium

PDB ID 4d05

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4d05"
Personal tools