This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4evu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:19, 7 October 2022) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of C-terminal domain of putative periplasmic protein ydgH from S. enterica==
==Crystal structure of C-terminal domain of putative periplasmic protein ydgH from S. enterica==
-
<StructureSection load='4evu' size='340' side='right' caption='[[4evu]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
+
<StructureSection load='4evu' size='340' side='right'caption='[[4evu]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4evu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EVU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EVU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4evu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EVU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EVU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4evu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4evu OCA], [https://pdbe.org/4evu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4evu RCSB], [https://www.ebi.ac.uk/pdbsum/4evu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4evu ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">STM1478, ydgH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4evu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4evu OCA], [http://pdbe.org/4evu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4evu RCSB], [http://www.ebi.ac.uk/pdbsum/4evu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4evu ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8ZPL1_SALTY Q8ZPL1_SALTY]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Salty]]
+
[[Category: Large Structures]]
-
[[Category: Adkins, J N]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-
[[Category: Brown, R N]]
+
[[Category: Adkins JN]]
-
[[Category: Cort, J R]]
+
[[Category: Brown RN]]
-
[[Category: Cui, H]]
+
[[Category: Cort JR]]
-
[[Category: Heffron, F]]
+
[[Category: Cui H]]
-
[[Category: Joachimiak, A]]
+
[[Category: Heffron F]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Michalska, K]]
+
[[Category: Michalska K]]
-
[[Category: Nakayasu, E S]]
+
[[Category: Nakayasu ES]]
-
[[Category: PCSEP, Program for the Characterization of Secreted Effector Proteins]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A]]
+
[[Category: Xu X]]
-
[[Category: Xu, X]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Pcsep]]
+
-
[[Category: Program for the characterization of secreted effector protein]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Secreted effector]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of C-terminal domain of putative periplasmic protein ydgH from S. enterica

PDB ID 4evu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools