This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4h35

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:57, 3 November 2022) (edit) (undo)
 
Line 1: Line 1:
==Feruloyl Esterase Domain of XYNY from Clostridium thermocellum before exposure to 266nm UV laser==
==Feruloyl Esterase Domain of XYNY from Clostridium thermocellum before exposure to 266nm UV laser==
-
<StructureSection load='4h35' size='340' side='right' caption='[[4h35]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4h35' size='340' side='right'caption='[[4h35]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4h35]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"ruminiclostridium_thermocellum"_yutin_and_galperin_2013 "ruminiclostridium thermocellum" yutin and galperin 2013]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H35 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4H35 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4h35]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H35 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h35 OCA], [https://pdbe.org/4h35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h35 RCSB], [https://www.ebi.ac.uk/pdbsum/4h35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h35 ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gkk|1gkk]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xynY ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1515 "Ruminiclostridium thermocellum" Yutin and Galperin 2013])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h35 OCA], [http://pdbe.org/4h35 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4h35 RCSB], [http://www.ebi.ac.uk/pdbsum/4h35 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4h35 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYNY_ACETH XYNY_ACETH]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ruminiclostridium thermocellum yutin and galperin 2013]]
+
[[Category: Acetivibrio thermocellus]]
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Large Structures]]
-
[[Category: Pereira, P J.B]]
+
[[Category: Pereira PJB]]
-
[[Category: Sanctis, D de]]
+
[[Category: De Sanctis D]]
-
[[Category: Alpha and beta protein]]
+
-
[[Category: Hydrolase]]
+

Current revision

Feruloyl Esterase Domain of XYNY from Clostridium thermocellum before exposure to 266nm UV laser

PDB ID 4h35

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4h35"
Personal tools