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4hqm
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4hqm is ON HOLD Authors: Ji, Q., Zhang, L., Jones, M.B., Sun, F., Deng, X., Liang, H., Brugarolas, P., Gao, N., Peterson, S.N., Lan, L., Bae, T., He...) |
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| - | '''Unreleased structure''' | ||
| - | The | + | ==The crystal structure of QsrR-menadione complex== |
| + | <StructureSection load='4hqm' size='340' side='right'caption='[[4hqm]], [[Resolution|resolution]] 2.55Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4hqm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HQM FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=17Z:2-METHYLNAPHTHALENE-1,4-DIOL'>17Z</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hqm OCA], [https://pdbe.org/4hqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hqm RCSB], [https://www.ebi.ac.uk/pdbsum/4hqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hqm ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Quinone molecules are intracellular electron-transport carriers, as well as critical intra- and extracellular signals. However, transcriptional regulation of quinone signaling and its molecular basis are poorly understood. Here, we identify a thiol-stress-sensing regulator YodB family transcriptional regulator as a central component of quinone stress response of Staphylococcus aureus, which we have termed the quinone-sensing and response repressor (QsrR). We also identify and confirm an unprecedented quinone-sensing mechanism based on the S-quinonization of the essential residue Cys-5. Structural characterizations of the QsrR-DNA and QsrR-menadione complexes further reveal that the covalent association of menadione directly leads to the release of QsrR from operator DNA following a 10 degrees rigid-body rotation as well as a 9-A elongation between the dimeric subunits. The molecular level characterization of this quinone-sensing transcriptional regulator provides critical insights into quinone-mediated gene regulation in human pathogens. | ||
| - | + | Molecular mechanism of quinone signaling mediated through S-quinonization of a YodB family repressor QsrR.,Ji Q, Zhang L, Jones MB, Sun F, Deng X, Liang H, Cho H, Brugarolas P, Gao YN, Peterson SN, Lan L, Bae T, He C Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):5010-5. doi:, 10.1073/pnas.1219446110. Epub 2013 Mar 11. PMID:23479646<ref>PMID:23479646</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| + | </div> | ||
| + | <div class="pdbe-citations 4hqm" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Staphylococcus aureus]] | ||
| + | [[Category: Bae T]] | ||
| + | [[Category: Brugarolas P]] | ||
| + | [[Category: Deng X]] | ||
| + | [[Category: Gao N]] | ||
| + | [[Category: He C]] | ||
| + | [[Category: Ji Q]] | ||
| + | [[Category: Jones MB]] | ||
| + | [[Category: Lan L]] | ||
| + | [[Category: Liang H]] | ||
| + | [[Category: Peterson SN]] | ||
| + | [[Category: Sun F]] | ||
| + | [[Category: Zhang L]] | ||
Current revision
The crystal structure of QsrR-menadione complex
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Categories: Large Structures | Staphylococcus aureus | Bae T | Brugarolas P | Deng X | Gao N | He C | Ji Q | Jones MB | Lan L | Liang H | Peterson SN | Sun F | Zhang L
