4idc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of the Fragaria x ananassa enone oxidoreductase in complex with NADPH and HDMF==
==Structure of the Fragaria x ananassa enone oxidoreductase in complex with NADPH and HDMF==
-
<StructureSection load='4idc' size='340' side='right' caption='[[4idc]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4idc' size='340' side='right'caption='[[4idc]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4idc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/European_strawberry European strawberry]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IDC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4idc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fragaria_vesca Fragaria vesca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IDC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1XX:(2R)-4-HYDROXY-2,5-DIMETHYLFURAN-3(2H)-ONE'>1XX</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1XX:(2R)-4-HYDROXY-2,5-DIMETHYLFURAN-3(2H)-ONE'>1XX</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ida|4ida]], [[4idb|4idb]], [[4idd|4idd]], [[4ide|4ide]], [[4idf|4idf]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4idc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4idc OCA], [https://pdbe.org/4idc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4idc RCSB], [https://www.ebi.ac.uk/pdbsum/4idc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4idc ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gene28406 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57918 European strawberry])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4idc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4idc OCA], [http://pdbe.org/4idc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4idc RCSB], [http://www.ebi.ac.uk/pdbsum/4idc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4idc ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ENOX_FRAVE ENOX_FRAVE] Enone oxidoreductase involved in the biosynthesis of 4-hydroxy-2,5-dimethyl-3(2H)-furanone (HDMF or furaneol), the key flavor compound in strawberries.[UniProtKB:Q84V25]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: European strawberry]]
+
[[Category: Fragaria vesca]]
-
[[Category: Schiefner, A]]
+
[[Category: Large Structures]]
-
[[Category: Skerra, A]]
+
[[Category: Schiefner A]]
-
[[Category: 4-hydroxy-2]]
+
[[Category: Skerra A]]
-
[[Category: Enone oxidoreductase]]
+
-
[[Category: Furaneol]]
+
-
[[Category: Hdmf]]
+
-
[[Category: Hydride transfer]]
+
-
[[Category: Medium chain dehydrogenase/reductase family]]
+
-
[[Category: Nadh]]
+
-
[[Category: Nadph]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Zinc-independent]]
+

Revision as of 09:02, 9 November 2022

Structure of the Fragaria x ananassa enone oxidoreductase in complex with NADPH and HDMF

PDB ID 4idc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools