This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4iic

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (20:47, 16 November 2022) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine==
==Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine==
-
<StructureSection load='4iic' size='340' side='right' caption='[[4iic]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4iic' size='340' side='right'caption='[[4iic]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4iic]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspac Aspac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IIC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IIC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4iic]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_aculeatus Aspergillus aculeatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IIC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IIC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=IFM:5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE'>IFM</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=IFM:5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE'>IFM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4iib|4iib]], [[4iid|4iid]], [[4iie|4iie]], [[4iif|4iif]], [[4iig|4iig]], [[4iih|4iih]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4iic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4iic OCA], [https://pdbe.org/4iic PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4iic RCSB], [https://www.ebi.ac.uk/pdbsum/4iic PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4iic ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bgl1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5053 ASPAC])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4iic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4iic OCA], [http://pdbe.org/4iic PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4iic RCSB], [http://www.ebi.ac.uk/pdbsum/4iic PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4iic ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BGL1_ASPAC BGL1_ASPAC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 20:
==See Also==
==See Also==
-
*[[Beta-glucosidase|Beta-glucosidase]]
+
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspac]]
+
[[Category: Aspergillus aculeatus]]
-
[[Category: Beta-glucosidase]]
+
[[Category: Large Structures]]
-
[[Category: Fushinobu, S]]
+
[[Category: Fushinobu S]]
-
[[Category: Kawaguchi, T]]
+
[[Category: Kawaguchi T]]
-
[[Category: Sumitani, J]]
+
[[Category: Sumitani J]]
-
[[Category: Suzuki, K]]
+
[[Category: Suzuki K]]
-
[[Category: Extracellular]]
+
-
[[Category: High-mannose n-glycosylation]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine

PDB ID 4iic

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4iic"
Personal tools