1j1h

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[[Image:1j1h.gif|left|200px]]
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{{Structure
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1h OCA], [http://www.ebi.ac.uk/pdbsum/1j1h PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1j1h RCSB]</span>
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'''Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus'''
'''Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus'''
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[[Category: Terada, T.]]
[[Category: Terada, T.]]
[[Category: Yokoyama, S.]]
[[Category: Yokoyama, S.]]
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[[Category: ob fold]]
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[[Category: Ob fold]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: Rsgi]]
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[[Category: smpb]]
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[[Category: Smpb]]
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[[Category: ssra associated protein]]
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[[Category: Ssra associated protein]]
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[[Category: structural genomic]]
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[[Category: Structural genomic]]
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Revision as of 17:41, 2 May 2008

Image:1j1h.gif

Template:STRUCTURE 1j1h

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus


Overview

Small protein B (SmpB) is required for trans-translation, binding specifically to tmRNA. We show here the solution structure of SmpB from an extremely thermophilic bacterium, Thermus thermophilus HB8, determined by heteronuclear nuclear magnetic resonance methods. The core of the protein consists of an antiparallel beta-barrel twisted up from eight beta-strands, each end of which is capped with the second or third helix, and the first helix is located beside the barrel. Its C-terminal sequence (20 residues), which is rich in basic residues, shows a poorly structured form, as often seen in isolated ribosomal proteins. The results are discussed in relation to the oligonucleotide binding fold.

About this Structure

1J1H is a Single protein structure of sequence from Thermus thermophilus. Full crystallographic information is available from OCA.

Reference

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus., Someya T, Nameki N, Hosoi H, Suzuki S, Hatanaka H, Fujii M, Terada T, Shirouzu M, Inoue Y, Shibata T, Kuramitsu S, Yokoyama S, Kawai G, FEBS Lett. 2003 Jan 30;535(1-3):94-100. PMID:12560085 Page seeded by OCA on Fri May 2 20:41:13 2008

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