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1j39

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[[Image:1j39.jpg|left|200px]]
[[Image:1j39.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1j39 |SIZE=350|CAPTION= <scene name='initialview01'>1j39</scene>, resolution 1.87&Aring;
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The line below this paragraph, containing "STRUCTURE_1j39", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=UPG:URIDINE-5&#39;-DIPHOSPHATE-GLUCOSE'>UPG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_beta-glucosyltransferase DNA beta-glucosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.27 2.4.1.27] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= BGT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 Enterobacteria phage T4])
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-->
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|DOMAIN=
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{{STRUCTURE_1j39| PDB=1j39 | SCENE= }}
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|RELATEDENTRY=[[1c3j|1C3J]], [[2bgt|2BGT]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j39 OCA], [http://www.ebi.ac.uk/pdbsum/1j39 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1j39 RCSB]</span>
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}}
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'''Crystal Structure of T4 phage BGT in complex with its UDP-glucose substrate'''
'''Crystal Structure of T4 phage BGT in complex with its UDP-glucose substrate'''
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[[Category: Lariviere, L.]]
[[Category: Lariviere, L.]]
[[Category: Morera, S.]]
[[Category: Morera, S.]]
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[[Category: glycosyltransferase]]
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[[Category: Glycosyltransferase]]
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[[Category: gt-b]]
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[[Category: Gt-b]]
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[[Category: udp-glucose]]
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[[Category: Udp-glucose]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 20:45:07 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:28:14 2008''
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Revision as of 17:45, 2 May 2008

Template:STRUCTURE 1j39

Crystal Structure of T4 phage BGT in complex with its UDP-glucose substrate


Overview

T4 phage beta-glucosyltransferase (BGT) is an inverting glycosyltransferase (GT) that transfers glucose from uridine diphospho-glucose (UDP-glucose) to an acceptor modified DNA. BGT belongs to the GT-B structural superfamily, represented, so far, by five different inverting or retaining GT families. Here, we report three high-resolution X-ray structures of BGT and a point mutant solved in the presence of UDP-glucose. The two co-crystal structures of the D100A mutant show that, unlike the wild-type enzyme, this mutation prevents glucose hydrolysis. This strongly indicates that Asp100 is the catalytic base. We obtained the wild-type BGT-UDP-glucose complex by soaking substrate-free BGT crystals. Comparison with a previous structure of BGT solved in the presence of the donor product UDP and an acceptor analogue provides the first model of an inverting GT-B enzyme in which both the donor and acceptor substrates are bound to the active site. The structural analyses support the in-line displacement reaction mechanism previously proposed, locate residues involved in donor substrate specificity and identify the catalytic base.

About this Structure

1J39 is a Single protein structure of sequence from Enterobacteria phage t4. Full crystallographic information is available from OCA.

Reference

Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism., Lariviere L, Gueguen-Chaignon V, Morera S, J Mol Biol. 2003 Jul 25;330(5):1077-86. PMID:12860129 Page seeded by OCA on Fri May 2 20:45:07 2008

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