This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4jhg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin==
==Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin==
-
<StructureSection load='4jhg' size='340' side='right' caption='[[4jhg]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
<StructureSection load='4jhg' size='340' side='right'caption='[[4jhg]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4jhg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Barrel_medic Barrel medic]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rws 3rws]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JHG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JHG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4jhg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Medicago_truncatula Medicago truncatula]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rws 3rws]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JHG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JHG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZEA:(2E)-2-METHYL-4-(9H-PURIN-6-YLAMINO)BUT-2-EN-1-OL'>ZEA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZEA:(2E)-2-METHYL-4-(9H-PURIN-6-YLAMINO)BUT-2-EN-1-OL'>ZEA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gy9|4gy9]], [[1icx|1icx]], [[2qim|2qim]], [[3us7|3us7]], [[4jhh|4jhh]], [[4jhi|4jhi]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jhg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jhg OCA], [https://pdbe.org/4jhg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jhg RCSB], [https://www.ebi.ac.uk/pdbsum/4jhg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jhg ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MtN13 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3880 Barrel medic])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jhg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jhg OCA], [http://pdbe.org/4jhg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jhg RCSB], [http://www.ebi.ac.uk/pdbsum/4jhg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jhg ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NOD13_MEDTR NOD13_MEDTR] May be involved in nodule organogenesis rather in the processes related to nitrogen fixation or interactions with the bacteria. May regulate nodulation by controlling the levels of freely available cytokinins.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Barrel medic]]
+
[[Category: Large Structures]]
-
[[Category: Brzezinski, K]]
+
[[Category: Medicago truncatula]]
-
[[Category: Ciesielska, A]]
+
[[Category: Brzezinski K]]
-
[[Category: Dauter, M]]
+
[[Category: Ciesielska A]]
-
[[Category: Dauter, Z]]
+
[[Category: Dauter M]]
-
[[Category: Jaskolski, M]]
+
[[Category: Dauter Z]]
-
[[Category: Ruszkowski, M]]
+
[[Category: Jaskolski M]]
-
[[Category: Sikorski, M]]
+
[[Category: Ruszkowski M]]
-
[[Category: Tusnio, K]]
+
[[Category: Sikorski M]]
-
[[Category: Cytokinin binding]]
+
[[Category: Tusnio K]]
-
[[Category: Legume-bacteria symbiosis]]
+
-
[[Category: Nitrogen fixation]]
+
-
[[Category: Nodulation]]
+
-
[[Category: Nodulin]]
+
-
[[Category: Plant protein]]
+
-
[[Category: Pr-10 fold]]
+

Revision as of 11:13, 24 November 2022

Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin

PDB ID 4jhg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4jhg"
Personal tools