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4kjp

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{{STRUCTURE_4kjp| PDB=4kjp | SCENE= }}
 
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===Structure of the CLC-ec1 deltaNC construct in the absence of halide===
 
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{{ABSTRACT_PUBMED_24036509}}
 
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==Function==
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==Structure of the CLC-ec1 deltaNC construct in the absence of halide==
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[[http://www.uniprot.org/uniprot/CLCA_ECOLI CLCA_ECOLI]] Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response.<ref>PMID:12384697</ref> <ref>PMID:14985752</ref> <ref>PMID:16341087</ref> <ref>PMID:16905147</ref> <ref>PMID:18678918</ref>
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<StructureSection load='4kjp' size='340' side='right'caption='[[4kjp]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4kjp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KJP FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjp OCA], [https://pdbe.org/4kjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kjp RCSB], [https://www.ebi.ac.uk/pdbsum/4kjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjp ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CLCA_ECOLI CLCA_ECOLI] Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response.<ref>PMID:12384697</ref> <ref>PMID:14985752</ref> <ref>PMID:16341087</ref> <ref>PMID:16905147</ref> <ref>PMID:18678918</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cl-/H+ antiporters of the CLC superfamily transport anions across biological membranes in varied physiological contexts. These proteins are weakly selective among anions commonly studied, including Cl-, Br-, I-, NO3- and SCN-, but they seem to be very selective against F-. The recent discovery of a new CLC clade of F-/H+ antiporters, which are highly selective for F- over Cl-, led us to investigate the mechanism of Cl--over-F- selectivity by a CLC Cl-/H+ antiporter, CLC-ec1. By subjecting purified CLC-ec1 to anion transport measurements, electrophysiological recording, equilibrium ligand-binding studies and X-ray crystallography, we show that F- binds in the Cl- transport pathway with affinity similar to Cl- but stalls the transport cycle. Examination of various mutant antiporters implies a 'lock-down' mechanism of F- inhibition, in which F-, by virtue of its unique hydrogen-bonding chemistry, greatly retards a proton-linked conformational change essential for the transport cycle of CLC-ec1.
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==About this Structure==
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Fluoride-dependent interruption of the transport cycle of a CLC Cl/H antiporter.,Lim HH, Stockbridge RB, Miller C Nat Chem Biol. 2013 Sep 15. doi: 10.1038/nchembio.1336. PMID:24036509<ref>PMID:24036509</ref>
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[[4kjp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli] and [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJP OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:024036509</ref><references group="xtra"/><references/>
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</div>
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[[Category: Ecoli]]
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<div class="pdbe-citations 4kjp" style="background-color:#fffaf0;"></div>
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[[Category: Lk3 transgenic mice]]
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== References ==
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[[Category: Lim, H H.]]
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<references/>
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[[Category: Miller, C]]
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__TOC__
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[[Category: Membrane protein]]
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</StructureSection>
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[[Category: Membrane transporting protein]]
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[[Category: Escherichia coli K-12]]
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[[Category: Tranport protein]]
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Lim H-H]]
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[[Category: Miller C]]

Current revision

Structure of the CLC-ec1 deltaNC construct in the absence of halide

PDB ID 4kjp

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