This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4kys

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Clostridium botulinum thiaminase I in complex with thiamin==
==Clostridium botulinum thiaminase I in complex with thiamin==
-
<StructureSection load='4kys' size='340' side='right' caption='[[4kys]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
+
<StructureSection load='4kys' size='340' side='right'caption='[[4kys]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4kys]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clob1 Clob1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KYS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4kys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum_A_str._ATCC_19397 Clostridium botulinum A str. ATCC 19397]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KYS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=VIB:3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM'>VIB</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=VIB:3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM'>VIB</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CLB_0812 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=441770 CLOB1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kys OCA], [https://pdbe.org/4kys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kys RCSB], [https://www.ebi.ac.uk/pdbsum/4kys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kys ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thiamine_pyridinylase Thiamine pyridinylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.2 2.5.1.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kys OCA], [http://pdbe.org/4kys PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kys RCSB], [http://www.ebi.ac.uk/pdbsum/4kys PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kys ProSAT]</span></td></tr>
+
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 18: Line 16:
</div>
</div>
<div class="pdbe-citations 4kys" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4kys" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Thiaminase|Thiaminase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Clob1]]
+
[[Category: Clostridium botulinum A str. ATCC 19397]]
-
[[Category: Thiamine pyridinylase]]
+
[[Category: Large Structures]]
-
[[Category: Begley, T P]]
+
[[Category: Begley TP]]
-
[[Category: Ealick, S E]]
+
[[Category: Ealick SE]]
-
[[Category: Shome, B]]
+
[[Category: Shome B]]
-
[[Category: Sikowitz, M D]]
+
[[Category: Sikowitz MD]]
-
[[Category: Zhang, Y]]
+
[[Category: Zhang Y]]
-
[[Category: Periplasmic binding protein type 2 fold]]
+
-
[[Category: Thiamin degradation]]
+
-
[[Category: Thiaminase i]]
+
-
[[Category: Transferase]]
+

Revision as of 09:21, 7 December 2022

Clostridium botulinum thiaminase I in complex with thiamin

PDB ID 4kys

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools