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Deaminase 3D structures

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Current revision (11:24, 18 December 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 6: Line 6:
*Cytidine deaminase
*Cytidine deaminase
 +
**[[6l08]] – CDA1 – ''Arabidopsis thaliana''<BR />
**[[1r5t]] – yCDA - yeast <BR />
**[[1r5t]] – yCDA - yeast <BR />
**[[2a8n]] – AtCDA – ''Agrobacterium tumefaciens'' <BR />
**[[2a8n]] – AtCDA – ''Agrobacterium tumefaciens'' <BR />
Line 16: Line 17:
**[[3r2n]] – CDA – ''Mycobacterium leprae'' <BR />
**[[3r2n]] – CDA – ''Mycobacterium leprae'' <BR />
**[[4f3w]] – CDA – ''Mycobacterium marinum'' <BR />
**[[4f3w]] – CDA – ''Mycobacterium marinum'' <BR />
 +
**[[6kw6]] – CDA – ''Streptomyces noursei''<BR />
*''Cytidine deaminase complex with nucleoside''
*''Cytidine deaminase complex with nucleoside''
Line 37: Line 39:
**[[1k6w]] – EcCDDA <BR />
**[[1k6w]] – EcCDDA <BR />
**[[1r9x]], [[1r9y]], [[1r9z]], [[1ra0]], [[1ra5]], [[3g77]] – EcCDDA (mutant)<BR />
**[[1r9x]], [[1r9y]], [[1r9z]], [[1ra0]], [[1ra5]], [[3g77]] – EcCDDA (mutant)<BR />
 +
*''Cytosine deaminase complex''
*''Cytosine deaminase complex''
Line 47: Line 50:
**[[1rak]] – EcCDDA (mutant) + pyrimidine derivative<BR />
**[[1rak]] – EcCDDA (mutant) + pyrimidine derivative<BR />
**[[3o7u]] – EcCDDA + Zn + phosphono-cytosine<BR />
**[[3o7u]] – EcCDDA + Zn + phosphono-cytosine<BR />
-
**[[4r7w]], [[4r85]], [[4r88]] – KpCDDA + cytosine derivative – ''Klebsiella pneumoniae''<BR />
+
**[[6k63]] – KpCDDA + Zn – ''Klebsiella pneumoniae''<BR />
 +
**[[4r7w]], [[4r85]], [[4r88]] – KpCDDA + cytosine derivative<BR />
* Deoxycytidylate deaminase
* Deoxycytidylate deaminase
Line 62: Line 66:
**[[3e0l]] – hGDA<br />
**[[3e0l]] – hGDA<br />
 +
**[[6oh9]] – yGDA + Zn<br />
 +
**[[6ohb]], [[6ohc]] – EcGDA + Zn<br />
**[[1tiy]], [[1wkq]] – BsGDA <BR />
**[[1tiy]], [[1wkq]] – BsGDA <BR />
Line 70: Line 76:
**[[2i9u]] – GDA + guanine – ''Clostridium acetobutylicum'' <BR />
**[[2i9u]] – GDA + guanine – ''Clostridium acetobutylicum'' <BR />
**[[2ood]] – GDA + guanine – ''Bradrhizobium japonicum'' <BR />
**[[2ood]] – GDA + guanine – ''Bradrhizobium japonicum'' <BR />
-
**[[4lc5]], [[4lcn]], [[4hrq]] – NeGDA + guanine derivative<BR />
+
**[[4lc5]], [[4lcn]], [[4hrq]], [[7c3t]], [[7c3u]] – NeGDA + guanine derivative<BR />
**[[4hrw]] – NeGDA (mutant) + guanine derivative<BR />
**[[4hrw]] – NeGDA (mutant) + guanine derivative<BR />
**[[4lco]] – NeGDA + ameline<BR />
**[[4lco]] – NeGDA + ameline<BR />
Line 76: Line 82:
**[[4ld2]] – NeGDA + cytidine<BR />
**[[4ld2]] – NeGDA + cytidine<BR />
**[[4ld4]] – NeGDA + cytosine<BR />
**[[4ld4]] – NeGDA + cytosine<BR />
 +
 +
*Guanosine deaminase
 +
 +
**[[7dbf]] – AtGSDA + Zn<br />
 +
**[[7dc9]] – AtGSDA + Zn + GMP<br />
 +
**[[7dca]] – AtGSDA + Zn + xanthosine<br />
 +
**[[7dcb]] – AtGSDA + Zn + inosine<br />
 +
**[[7dm6]] – AtGSDA + Zn + crotonoside<br />
 +
**[[7dcw]] – AtGSDA + Zn + adeosine<br />
 +
**[[7dgc]], [[7dh1]], [[7dlc]], [[7dm5]], [[7dox]], [[7dow]], [[7doy]], [[7dpk]] – AtGSDA + Zn + guanosine derivative<br />
 +
**[[7dqn]], [[7w1q]] – AtGSDA (mutant) + Zn + guanosine derivative<br />
*Adenine deaminase
*Adenine deaminase
Line 100: Line 117:
**[[4r7t]] – VcGPD <br />
**[[4r7t]] – VcGPD <br />
**[[5hj5]] – VcGPD + fructose 6-phosphate + glucose-6-phosphate<BR />
**[[5hj5]] – VcGPD + fructose 6-phosphate + glucose-6-phosphate<BR />
 +
**[[7lqm]] – GPD – ''Pasteurelia multocida'' <BR />
 +
**[[7lqn]] – GPD –'' Haemophilus influenzae''<BR />
*1-aminocyclopropane-1-carboxylate (ACC) deaminase
*1-aminocyclopropane-1-carboxylate (ACC) deaminase
Line 179: Line 198:
*2-aminomuconate deaminase
*2-aminomuconate deaminase
-
**[[6izh]] – PsAMD – <BR />
+
**[[6izh]] – PsAMD <BR />
 +
 
 +
*Aminofutalosine deaminase
 +
 
 +
**[[7lkj]] – HpAMD – ''Helicobacter pylori''<BR />
 +
**[[7lkk]] – HpAMD + inhibitor<BR />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D Structures of deaminase

Updated on 18-December-2022

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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