This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ylf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 21 December 2022) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ylf.gif|left|200px]]
 
-
<!--
+
==X-ray crystal structure of BC1842 protein from Bacillus cereus, a member of the Rrf2 family of putative transcription regulators.==
-
The line below this paragraph, containing "STRUCTURE_1ylf", creates the "Structure Box" on the page.
+
<StructureSection load='1ylf' size='340' side='right'caption='[[1ylf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ylf]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YLF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YLF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ylf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ylf OCA], [https://pdbe.org/1ylf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ylf RCSB], [https://www.ebi.ac.uk/pdbsum/1ylf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ylf ProSAT], [https://www.topsan.org/Proteins/MCSG/1ylf TOPSAN]</span></td></tr>
-
{{STRUCTURE_1ylf| PDB=1ylf | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''X-ray crystal structure of BC1842 protein from Bacillus cereus, a member of the Rrf2 family of putative transcription regulators.'''
+
[https://www.uniprot.org/uniprot/Q81EX1_BACCR Q81EX1_BACCR]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1YLF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YLF OCA].
+
<jmolCheckbox>
-
[[Category: Bacillus cereus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yl/1ylf_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Collart, F.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ylf ConSurf].
-
[[Category: Moy, S.]]
+
<div style="clear:both"></div>
-
[[Category: Osipiuk, J.]]
+
__TOC__
-
[[Category: Wu, R.]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Bacillus cereus ATCC 14579]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Collart F]]
-
[[Category: Psi]]
+
[[Category: Joachimiak A]]
-
[[Category: Rrf2 family]]
+
[[Category: Moy S]]
-
[[Category: Structural genomic]]
+
[[Category: Osipiuk J]]
-
[[Category: Transcription regulator]]
+
[[Category: Wu R]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 16:28:18 2008''
+

Current revision

X-ray crystal structure of BC1842 protein from Bacillus cereus, a member of the Rrf2 family of putative transcription regulators.

PDB ID 1ylf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ylf"
Personal tools