This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2axe
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS== | ==IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS== | ||
| - | <StructureSection load='2axe' size='340' side='right' caption='[[2axe]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2axe' size='340' side='right'caption='[[2axe]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2axe]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2axe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Talaromyces_purpureogenus Talaromyces purpureogenus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AXE FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TYI:3,5-DIIODOTYROSINE'>TYI</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2axe OCA], [https://pdbe.org/2axe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2axe RCSB], [https://www.ebi.ac.uk/pdbsum/2axe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2axe ProSAT]</span></td></tr> | |
| - | <tr | + | </table> |
| - | + | == Function == | |
| - | <table> | + | [https://www.uniprot.org/uniprot/AXE2_TALPU AXE2_TALPU] Degrades acetylated xylans by cleaving acetyl side groups from the hetero-xylan backbone.<ref>PMID:8756392</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ax/2axe_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ax/2axe_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2axe ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 26: | Line 27: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2axe" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Acetylxylan esterase|Acetylxylan esterase]] | + | *[[Acetylxylan esterase 3D structures|Acetylxylan esterase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Talaromyces purpureogenus]] |
| - | [[Category: Erman | + | [[Category: Erman M]] |
| - | [[Category: Eyzaguirre | + | [[Category: Eyzaguirre J]] |
| - | [[Category: Ghosh | + | [[Category: Ghosh D]] |
| - | [[Category: Jornvall | + | [[Category: Jornvall H]] |
| - | [[Category: Lala | + | [[Category: Lala P]] |
| - | [[Category: Li | + | [[Category: Li N]] |
| - | [[Category: Pangborn | + | [[Category: Pangborn W]] |
| - | [[Category: Sawicki | + | [[Category: Sawicki MW]] |
| - | [[Category: Thiel | + | [[Category: Thiel DJ]] |
| - | [[Category: Weeks | + | [[Category: Weeks DR]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS
| |||||||||||
Categories: Large Structures | Talaromyces purpureogenus | Erman M | Eyzaguirre J | Ghosh D | Jornvall H | Lala P | Li N | Pangborn W | Sawicki MW | Thiel DJ | Weeks DR

