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8bd5

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(New page: '''Unreleased structure''' The entry 8bd5 is ON HOLD Authors: Schmitz, M., Querques, I., Oberli, S., Chanez, C., Jinek, M. Description: Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recr...)
Current revision (09:07, 28 December 2022) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8bd5 is ON HOLD
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==Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex==
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<StructureSection load='8bd5' size='340' side='right'caption='[[8bd5]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8bd5]] is a 13 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12], [https://en.wikipedia.org/wiki/Scytonema_hofmannii Scytonema hofmannii] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8BD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8BD5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8bd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8bd5 OCA], [https://pdbe.org/8bd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8bd5 RCSB], [https://www.ebi.ac.uk/pdbsum/8bd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8bd5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A8M0FGU0_9CYAN A0A8M0FGU0_9CYAN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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CRISPR-Cas systems have been co-opted by Tn7-like transposable elements to direct RNA-guided transposition. Type V-K CRISPR-associated transposons rely on the concerted activities of the pseudonuclease Cas12k, the AAA+ ATPase TnsC, the Zn-finger protein TniQ, and the transposase TnsB. Here we present a cryo-electron microscopic structure of a target DNA-bound Cas12k-transposon recruitment complex comprised of RNA-guided Cas12k, TniQ, a polymeric TnsC filament and, unexpectedly, the ribosomal protein S15. Complex assembly, mediated by a network of interactions involving the guide RNA, TniQ, and S15, results in R-loop completion. TniQ contacts two TnsC protomers at the Cas12k-proximal filament end, likely nucleating its polymerization. Transposition activity assays corroborate our structural findings, implying that S15 is a bona fide component of the type V crRNA-guided transposon machinery. Altogether, our work uncovers key mechanistic aspects underpinning RNA-mediated assembly of CRISPR-associated transposons to guide their development as programmable tools for site-specific insertion of large DNA payloads.
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Authors: Schmitz, M., Querques, I., Oberli, S., Chanez, C., Jinek, M.
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Structural basis for the assembly of the type V CRISPR-associated transposon complex.,Schmitz M, Querques I, Oberli S, Chanez C, Jinek M Cell. 2022 Dec 22;185(26):4999-5010.e17. doi: 10.1016/j.cell.2022.11.009. Epub , 2022 Nov 25. PMID:36435179<ref>PMID:36435179</ref>
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Description: Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Jinek, M]]
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<div class="pdbe-citations 8bd5" style="background-color:#fffaf0;"></div>
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[[Category: Oberli, S]]
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== References ==
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[[Category: Querques, I]]
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<references/>
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[[Category: Schmitz, M]]
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__TOC__
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[[Category: Chanez, C]]
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</StructureSection>
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[[Category: Escherichia coli K-12]]
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[[Category: Large Structures]]
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[[Category: Scytonema hofmannii]]
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[[Category: Synthetic construct]]
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[[Category: Chanez C]]
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[[Category: Jinek M]]
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[[Category: Oberli S]]
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[[Category: Querques I]]
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[[Category: Schmitz M]]

Current revision

Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex

PDB ID 8bd5

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