This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4mpd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Staphyloferrin B precursor biosynthetic enzyme SbnB bound a-ketoglutarate and NAD+==
==Staphyloferrin B precursor biosynthetic enzyme SbnB bound a-ketoglutarate and NAD+==
-
<StructureSection load='4mpd' size='340' side='right' caption='[[4mpd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='4mpd' size='340' side='right'caption='[[4mpd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4mpd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staaw Staaw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MPD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MPD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4mpd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MW2 Staphylococcus aureus subsp. aureus MW2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MPD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=NAJ:NICOTINAMIDE-ADENINE-DINUCLEOTIDE+(ACIDIC+FORM)'>NAJ</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=NAJ:NICOTINAMIDE-ADENINE-DINUCLEOTIDE+(ACIDIC+FORM)'>NAJ</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m54|4m54]], [[4mp3|4mp3]], [[4mp6|4mp6]], [[4mp8|4mp8]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mpd OCA], [https://pdbe.org/4mpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mpd RCSB], [https://www.ebi.ac.uk/pdbsum/4mpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mpd ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sbnB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196620 STAAW])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mpd OCA], [http://pdbe.org/4mpd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4mpd RCSB], [http://www.ebi.ac.uk/pdbsum/4mpd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4mpd ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H3K9Y6_STAAE A0A0H3K9Y6_STAAE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Staaw]]
+
[[Category: Large Structures]]
-
[[Category: Kobylarz, M J]]
+
[[Category: Staphylococcus aureus subsp. aureus MW2]]
-
[[Category: Murphy, M E.P]]
+
[[Category: Kobylarz MJ]]
-
[[Category: Acega dehydrogenase]]
+
[[Category: Murphy MEP]]
-
[[Category: Iron]]
+
-
[[Category: L-dap synthesis]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Siderophore]]
+

Revision as of 09:59, 28 December 2022

Staphyloferrin B precursor biosynthetic enzyme SbnB bound a-ketoglutarate and NAD+

PDB ID 4mpd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools