This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2l4d
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 2l4d is ON HOLD Authors: Banci, L., Bertini, I., Ciofi-Baffoni, S., Kozyreva, T., Mori, M., Wang, S. Description: cytochrome c domain of pp3183 pro...) |
|||
| (9 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==cytochrome c domain of pp3183 protein from Pseudomonas putida== | |
| + | <StructureSection load='2l4d' size='340' side='right'caption='[[2l4d]]' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2l4d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_KT2440 Pseudomonas putida KT2440]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L4D FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l4d OCA], [https://pdbe.org/2l4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l4d RCSB], [https://www.ebi.ac.uk/pdbsum/2l4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l4d ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q88I19_PSEPK Q88I19_PSEPK] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Sco proteins are widespread in eukaryotic and in many prokaryotic organisms. They have a thioredoxin-like fold and bind a single copper(I) or copper(II) ion through a CXXXC motif and a conserved His ligand, with both tight and weak affinities. They have been implicated in the assembly of the Cu(A) site of cytochrome c oxidase as copper chaperones and/or thioredoxins. In this work we have structurally characterized a Sco domain which is naturally fused with a typical electron transfer molecule, i.e., cytochrome c, in Pseudomonas putida. The thioredoxin-like Sco domain does not bind copper(II), binds copper(I) with weak affinity without involving the conserved His, and has redox properties consisting of a thioredoxin activity and of the ability of reducing copper(II) to copper(I), and iron(III) to iron(II) of the cytochrome c domain. These findings indicate that the His ligand coordination is the discriminating factor for introducing a metallochaperone function in a thioredoxin-like fold, typically responsible for electron transfer processes. A comparative structural analysis of the Sco domain from P. putida versus eukaryotic Sco proteins revealed structural determinants affecting the formation of a tight-affinity versus a weak-affinity copper binding site in Sco proteins. | ||
| - | + | Sco proteins are involved in electron transfer processes.,Banci L, Bertini I, Ciofi-Baffoni S, Kozyreva T, Mori M, Wang S J Biol Inorg Chem. 2010 Dec 23. PMID:21181421<ref>PMID:21181421</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | <div class="pdbe-citations 2l4d" style="background-color:#fffaf0;"></div> | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pseudomonas putida KT2440]] | ||
| + | [[Category: Banci L]] | ||
| + | [[Category: Bertini I]] | ||
| + | [[Category: Ciofi-Baffoni S]] | ||
| + | [[Category: Kozyreva T]] | ||
| + | [[Category: Mori M]] | ||
| + | [[Category: Wang S]] | ||
Current revision
cytochrome c domain of pp3183 protein from Pseudomonas putida
| |||||||||||
