This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ntw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:39, 18 January 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Structure of acid-sensing ion channel in complex with snake toxin==
==Structure of acid-sensing ion channel in complex with snake toxin==
-
<StructureSection load='4ntw' size='340' side='right' caption='[[4ntw]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
+
<StructureSection load='4ntw' size='340' side='right'caption='[[4ntw]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ntw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick] and [http://en.wikipedia.org/wiki/Mictn Mictn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NTW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NTW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ntw]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] and [https://en.wikipedia.org/wiki/Micrurus_tener_tener Micrurus tener tener]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NTW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NTW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ntw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ntw OCA], [https://pdbe.org/4ntw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ntw RCSB], [https://www.ebi.ac.uk/pdbsum/4ntw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ntw ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hgc|3hgc]], [[2qts|2qts]], [[4nyk|4nyk]], [[4ntx|4ntx]], [[4nty|4nty]], [[4fz0|4fz0]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ASIC1, ACCN2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ntw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ntw OCA], [http://pdbe.org/4ntw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ntw RCSB], [http://www.ebi.ac.uk/pdbsum/4ntw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ntw ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ASIC1_CHICK ASIC1_CHICK]] Cation channel with high affinity for sodium, which is gated by extracellular protons and inhibited by the diuretic amiloride (By similarity).<ref>PMID:16002453</ref>
+
[https://www.uniprot.org/uniprot/ASIC1_CHICK ASIC1_CHICK] Cation channel with high affinity for sodium, which is gated by extracellular protons and inhibited by the diuretic amiloride (By similarity).<ref>PMID:16002453</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 20:
==See Also==
==See Also==
-
*[[Ion channels|Ion channels]]
+
*[[Ion channels 3D structures|Ion channels 3D structures]]
 +
*[[Phospholipase A2 homolog|Phospholipase A2 homolog]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chick]]
+
[[Category: Gallus gallus]]
-
[[Category: Mictn]]
+
[[Category: Large Structures]]
-
[[Category: Baconguis, I]]
+
[[Category: Micrurus tener tener]]
-
[[Category: Bohlen, C J]]
+
[[Category: Baconguis I]]
-
[[Category: Goehring, A]]
+
[[Category: Bohlen CJ]]
-
[[Category: Gouaux, E]]
+
[[Category: Goehring A]]
-
[[Category: Julius, D]]
+
[[Category: Gouaux E]]
-
[[Category: Ion channel]]
+
[[Category: Julius D]]
-
[[Category: Kunitz]]
+
-
[[Category: Membrane]]
+
-
[[Category: Nociception]]
+
-
[[Category: Phospholipase a2-like]]
+
-
[[Category: Transport protein-toxin complex]]
+

Current revision

Structure of acid-sensing ion channel in complex with snake toxin

PDB ID 4ntw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4ntw"
Personal tools