This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

7wr3

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 06:32, 25 January 2023

Crystal structure of MBP-fused OspC3 in complex with calmodulin

Structural highlights

7wr3 is a 4 chain structure with sequence from Bolitoglossa, Homo sapiens and Shigella flexneri. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:	, ,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MALE_ECOLI Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.OSPC3_SHIFL ADP-riboxanase effector that inhibits host cell pyroptosis (PubMed:23684308, PubMed:34409271, PubMed:34671164). Acts by mediating arginine ADP-riboxanation of host CASP4/CASP11, blocking CASP4/CASP11 autoprocessing (PubMed:34671164, PubMed:35338844, PubMed:35568036). This prevents CASP4 activation and ability to recognize and cleave GSDMD, thereby inhibiting LPS-induced pyroptosis (PubMed:34671164). ADP-riboxanation takes place in two steps: OspC3 first catalyzes ADP-ribosylation of target Arg, and then initiates a deamination to remove one N-omega group (PubMed:34671164). Independently of its ADP-riboxanase activity, acts as an inhibitor of calcium signaling by inhibiting host calmodulin, preventing activation of the JAK-STAT signaling pathway in response to interferon-beta (PubMed:35568036). Mechanistically, acts by binding to the apo form of calmodulin, preventing calcium-binding and ability to activate host CaMK2 (CAMKII), which is required to stimulate the JAK-STAT signaling pathway in response to interferon-beta (PubMed:35568036).^[1] ^[2] ^[3] ^[4] ^[5]

References

↑ Kobayashi T, Ogawa M, Sanada T, Mimuro H, Kim M, Ashida H, Akakura R, Yoshida M, Kawalec M, Reichhart JM, Mizushima T, Sasakawa C. The Shigella OspC3 effector inhibits caspase-4, antagonizes inflammatory cell death, and promotes epithelial infection. Cell Host Microbe. 2013 May 15;13(5):570-583. doi: 10.1016/j.chom.2013.04.012. PMID:23684308 doi:http://dx.doi.org/10.1016/j.chom.2013.04.012
↑ Oh C, Verma A, Hafeez M, Hogland B, Aachoui Y. Shigella OspC3 suppresses murine cytosolic LPS sensing. iScience. 2021 Jul 28;24(8):102910. doi: 10.1016/j.isci.2021.102910. eCollection , 2021 Aug 20. PMID:34409271 doi:http://dx.doi.org/10.1016/j.isci.2021.102910
↑ Li Z, Liu W, Fu J, Cheng S, Xu Y, Wang Z, Liu X, Shi X, Liu Y, Qi X, Liu X, Ding J, Shao F. Shigella evades pyroptosis by arginine ADP-riboxanation of caspase-11. Nature. 2021 Nov;599(7884):290-295. doi: 10.1038/s41586-021-04020-1. Epub 2021, Oct 20. PMID:34671164 doi:http://dx.doi.org/10.1038/s41586-021-04020-1
↑ Peng T, Tao X, Xia Z, Hu S, Xue J, Zhu Q, Pan X, Zhang Q, Li S. Pathogen hijacks programmed cell death signaling by arginine ADPR-deacylization of caspases. Mol Cell. 2022 May 19;82(10):1806-1820.e8. doi: 10.1016/j.molcel.2022.03.010. , Epub 2022 Mar 25. PMID:35338844 doi:http://dx.doi.org/10.1016/j.molcel.2022.03.010
↑ Alphonse N, Wanford JJ, Voak AA, Gay J, Venkhaya S, Burroughs O, Mathew S, Lee T, Evans SL, Zhao W, Frowde K, Alrehaili A, Dickenson RE, Munk M, Panina S, Mahmood IF, Llorian M, Stanifer ML, Boulant S, Berchtold MW, Bergeron JRC, Wack A, Lesser CF, Odendall C. A family of conserved bacterial virulence factors dampens interferon responses by blocking calcium signaling. Cell. 2022 Jun 23;185(13):2354-2369.e17. doi: 10.1016/j.cell.2022.04.028. Epub , 2022 May 13. PMID:35568036 doi:http://dx.doi.org/10.1016/j.cell.2022.04.028

1 Structural highlights
2 Function
3 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/7wr3"

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 7wr3 is ON HOLD  until Paper Publication
+==Crystal structure of MBP-fused OspC3 in complex with calmodulin==
+<StructureSection load='7wr3' size='340' side='right'caption='[[7wr3]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[7wr3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bolitoglossa Bolitoglossa], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WR3 FirstGlance]. <br>
-Description:
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NCA:NICOTINAMIDE'>NCA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7wr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7wr3 OCA], [https://pdbe.org/7wr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7wr3 RCSB], [https://www.ebi.ac.uk/pdbsum/7wr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7wr3 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[https://www.uniprot.org/uniprot/OSPC3_SHIFL OSPC3_SHIFL] ADP-riboxanase effector that inhibits host cell pyroptosis (PubMed:23684308, PubMed:34409271, PubMed:34671164). Acts by mediating arginine ADP-riboxanation of host CASP4/CASP11, blocking CASP4/CASP11 autoprocessing (PubMed:34671164, PubMed:35338844, PubMed:35568036). This prevents CASP4 activation and ability to recognize and cleave GSDMD, thereby inhibiting LPS-induced pyroptosis (PubMed:34671164). ADP-riboxanation takes place in two steps: OspC3 first catalyzes ADP-ribosylation of target Arg, and then initiates a deamination to remove one N-omega group (PubMed:34671164). Independently of its ADP-riboxanase activity, acts as an inhibitor of calcium signaling by inhibiting host calmodulin, preventing activation of the JAK-STAT signaling pathway in response to interferon-beta (PubMed:35568036). Mechanistically, acts by binding to the apo form of calmodulin, preventing calcium-binding and ability to activate host CaMK2 (CAMKII), which is required to stimulate the JAK-STAT signaling pathway in response to interferon-beta (PubMed:35568036).<ref>PMID:23684308</ref> <ref>PMID:34409271</ref> <ref>PMID:34671164</ref> <ref>PMID:35338844</ref> <ref>PMID:35568036</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Bolitoglossa]]
+[[Category: Homo sapiens]]
+[[Category: Large Structures]]
+[[Category: Shigella flexneri]]
+[[Category: Ding J]]
+[[Category: Hou YJ]]
+[[Category: Shao F]]
+[[Category: Zeng H]]

7wr3

From Proteopedia

Revision as of 06:32, 25 January 2023

Crystal structure of MBP-fused OspC3 in complex with calmodulin

Structural highlights

Function

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox