This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1vjz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1vjz" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vjz, resolution 2.05&Aring;" /> '''Crystal structure of...)
Current revision (06:40, 25 January 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1vjz.gif|left|200px]]<br /><applet load="1vjz" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1vjz, resolution 2.05&Aring;" />
 
-
'''Crystal structure of Endoglucanase (TM1752) from Thermotoga maritima at 2.05 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of Endoglucanase (TM1752) from Thermotoga maritima at 2.05 A resolution==
-
1VJZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Active as [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1VJZ OCA].
+
<StructureSection load='1vjz' size='340' side='right'caption='[[1vjz]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
[[Category: Cellulase]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1vjz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VJZ FirstGlance]. <br>
-
[[Category: Thermotoga maritima]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vjz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vjz OCA], [https://pdbe.org/1vjz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vjz RCSB], [https://www.ebi.ac.uk/pdbsum/1vjz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vjz ProSAT], [https://www.topsan.org/Proteins/JCSG/1vjz TOPSAN]</span></td></tr>
-
[[Category: endoglucanase]]
+
</table>
-
[[Category: jcsg]]
+
== Function ==
-
[[Category: joint center for structural genomics]]
+
[https://www.uniprot.org/uniprot/Q9X274_THEMA Q9X274_THEMA]
-
[[Category: protein structure initiative]]
+
== Evolutionary Conservation ==
-
[[Category: psi]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: structural genomics]]
+
Check<jmol>
-
[[Category: tm1752]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/1vjz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vjz ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:37:39 2007''
+
==See Also==
 +
*[[Glucanase 3D structures|Glucanase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermotoga maritima]]

Current revision

Crystal structure of Endoglucanase (TM1752) from Thermotoga maritima at 2.05 A resolution

PDB ID 1vjz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools