This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2huj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:46, 25 January 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2huj.png|left|200px]]
 
-
<!--
+
==Crystal structure of a protein of uknown function (NP_471338.1) from Listeria innocua at 1.74 A resolution==
-
The line below this paragraph, containing "STRUCTURE_2huj", creates the "Structure Box" on the page.
+
<StructureSection load='2huj' size='340' side='right'caption='[[2huj]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2huj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HUJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HUJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2huj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2huj OCA], [https://pdbe.org/2huj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2huj RCSB], [https://www.ebi.ac.uk/pdbsum/2huj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2huj ProSAT], [https://www.topsan.org/Proteins/JCSG/2huj TOPSAN]</span></td></tr>
-
{{STRUCTURE_2huj| PDB=2huj | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of a protein of uknown function (NP_471338.1) from Listeria innocua at 1.74 A resolution===
+
[https://www.uniprot.org/uniprot/Q92AB8_LISIN Q92AB8_LISIN]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2HUJ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HUJ OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hu/2huj_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold., Kozbial P, Xu Q, Chiu HJ, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Carlton D, Clayton T, Deller M, Duan L, Elias Y, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Spraggon G, Trout CV, van den Bedem H, Weekes D, White A, Wolf G, Zubieta C, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2008 May 15;71(3):1589-96. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18324683 18324683]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2huj ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Listeria innocua]]
[[Category: Listeria innocua]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
 
-
[[Category: Hypothetical protein]]
 
-
[[Category: Jcsg]]
 
-
[[Category: Joint center for structural genomic]]
 
-
[[Category: Np_471338 1]]
 
-
[[Category: Protein structure initiative]]
 
-
[[Category: Psi-2]]
 
-
[[Category: Structural genomic]]
 
-
[[Category: Unknown function]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 09:54:52 2008''
 

Current revision

Crystal structure of a protein of uknown function (NP_471338.1) from Listeria innocua at 1.74 A resolution

PDB ID 2huj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2huj"
Personal tools