This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2olt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2olt" size="350" color="white" frame="true" align="right" spinBox="true" caption="2olt, resolution 2.00&Aring;" /> '''Crystal structure of...)
Current revision (06:47, 25 January 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2olt.gif|left|200px]]<br /><applet load="2olt" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2olt, resolution 2.00&Aring;" />
 
-
'''Crystal structure of NP_719307.1 from Shewanella oneidensis at 2.00 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a phou-like protein (so_3770) from shewanella oneidensis mr-1 at 2.00 A resolution==
-
2OLT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_oneidensis Shewanella oneidensis] with <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLT OCA].
+
<StructureSection load='2olt' size='340' side='right'caption='[[2olt]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Shewanella oneidensis]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2olt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OLT FirstGlance]. <br>
-
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: CL]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2olt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2olt OCA], [https://pdbe.org/2olt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2olt RCSB], [https://www.ebi.ac.uk/pdbsum/2olt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2olt ProSAT], [https://www.topsan.org/Proteins/JCSG/2olt TOPSAN]</span></td></tr>
-
[[Category: GOL]]
+
</table>
-
[[Category: duf47]]
+
== Function ==
-
[[Category: jcsg]]
+
[https://www.uniprot.org/uniprot/Q8EAX1_SHEON Q8EAX1_SHEON]
-
[[Category: joint center for structural genomics]]
+
== Evolutionary Conservation ==
-
[[Category: np_719307.1]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: protein structure initiative]]
+
Check<jmol>
-
[[Category: psi-2]]
+
<jmolCheckbox>
-
[[Category: structural genomics]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2olt_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:13:02 2008''
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2olt ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Shewanella oneidensis MR-1]]

Current revision

Crystal structure of a phou-like protein (so_3770) from shewanella oneidensis mr-1 at 2.00 A resolution

PDB ID 2olt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools