This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2p10

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:48, 25 January 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2p10.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHONOPYRUVATE HYDROLASE (MLL9387) FROM MESORHIZOBIUM LOTI MAFF303099 AT 2.15 A RESOLUTION==
-
The line below this paragraph, containing "STRUCTURE_2p10", creates the "Structure Box" on the page.
+
<StructureSection load='2p10' size='340' side='right'caption='[[2p10]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2p10]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P10 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p10 OCA], [https://pdbe.org/2p10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p10 RCSB], [https://www.ebi.ac.uk/pdbsum/2p10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p10 ProSAT], [https://www.topsan.org/Proteins/JCSG/2p10 TOPSAN]</span></td></tr>
-
{{STRUCTURE_2p10| PDB=2p10 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHONOPYRUVATE HYDROLASE (MLL9387) FROM MESORHIZOBIUM LOTI MAFF303099 AT 2.15 A RESOLUTION===
+
[https://www.uniprot.org/uniprot/Q981G2_RHILO Q981G2_RHILO]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2P10 is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Mesorhizobium_loti_maff303099 Mesorhizobium loti maff303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P10 OCA].
+
<jmolCheckbox>
-
[[Category: Mesorhizobium loti maff303099]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p10_consurf.spt"</scriptWhenChecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Hydrolase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Jcsg]]
+
</jmolCheckbox>
-
[[Category: Joint center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p10 ConSurf].
-
[[Category: Protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: Psi-2]]
+
__TOC__
-
[[Category: Putative phosphonopyruvate hydrolase]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
 
+
[[Category: Mesorhizobium japonicum MAFF 303099]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 11:47:18 2010''
+

Current revision

CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHONOPYRUVATE HYDROLASE (MLL9387) FROM MESORHIZOBIUM LOTI MAFF303099 AT 2.15 A RESOLUTION

PDB ID 2p10

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools