This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qiw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:49, 25 January 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qiw.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a putative phosphoenolpyruvate phosphonomutase (ncgl1015, cgl1060) from corynebacterium glutamicum atcc 13032 at 1.80 A resolution==
-
|PDB= 2qiw |SIZE=350|CAPTION= <scene name='initialview01'>2qiw</scene>, resolution 1.800&Aring;
+
<StructureSection load='2qiw' size='340' side='right'caption='[[2qiw]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene>
+
<table><tr><td colspan='2'>[[2qiw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QIW FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Carboxyvinyl-carboxyphosphonate_phosphorylmutase Carboxyvinyl-carboxyphosphonate phosphorylmutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.23 2.7.8.23] </span>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
|GENE= NP_600288.1, Cgl1060 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196627 Corynebacterium glutamicum ATCC 13032])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qiw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qiw OCA], [https://pdbe.org/2qiw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qiw RCSB], [https://www.ebi.ac.uk/pdbsum/2qiw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qiw ProSAT], [https://www.topsan.org/Proteins/JCSG/2qiw TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2513 PrpB]</span>
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qiw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qiw OCA], [http://www.ebi.ac.uk/pdbsum/2qiw PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2qiw RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q8NRI8_CORGL Q8NRI8_CORGL]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of putative PEP phosphonomutase (NP_600288.1) from Corynebacterium glutamicum ATCC 13032 Kitasato at 1.80 A resolution'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qiw_consurf.spt"</scriptWhenChecked>
-
2QIW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum_atcc_13032 Corynebacterium glutamicum atcc 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIW OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Carboxyvinyl-carboxyphosphonate phosphorylmutase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Corynebacterium glutamicum atcc 13032]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qiw ConSurf].
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: jcsg]]
+
__TOC__
-
[[Category: joint center for structural genomic]]
+
</StructureSection>
-
[[Category: np_600288 1]]
+
[[Category: Corynebacterium glutamicum ATCC 13032]]
-
[[Category: protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: psi-2]]
+
-
[[Category: putative pep phosphonomutase]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Mar 25 23:34:41 2008''
+

Current revision

Crystal structure of a putative phosphoenolpyruvate phosphonomutase (ncgl1015, cgl1060) from corynebacterium glutamicum atcc 13032 at 1.80 A resolution

PDB ID 2qiw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools