This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qiw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:49, 25 January 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qiw.png|left|200px]]
 
-
<!--
+
==Crystal structure of a putative phosphoenolpyruvate phosphonomutase (ncgl1015, cgl1060) from corynebacterium glutamicum atcc 13032 at 1.80 A resolution==
-
The line below this paragraph, containing "STRUCTURE_2qiw", creates the "Structure Box" on the page.
+
<StructureSection load='2qiw' size='340' side='right'caption='[[2qiw]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qiw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QIW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qiw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qiw OCA], [https://pdbe.org/2qiw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qiw RCSB], [https://www.ebi.ac.uk/pdbsum/2qiw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qiw ProSAT], [https://www.topsan.org/Proteins/JCSG/2qiw TOPSAN]</span></td></tr>
-
{{STRUCTURE_2qiw| PDB=2qiw | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of putative PEP phosphonomutase (NP_600288.1) from Corynebacterium glutamicum ATCC 13032 Kitasato at 1.80 A resolution===
+
[https://www.uniprot.org/uniprot/Q8NRI8_CORGL Q8NRI8_CORGL]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2QIW is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum_atcc_13032 Corynebacterium glutamicum atcc 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIW OCA].
+
<jmolCheckbox>
-
[[Category: Carboxyvinyl-carboxyphosphonate phosphorylmutase]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qiw_consurf.spt"</scriptWhenChecked>
-
[[Category: Corynebacterium glutamicum atcc 13032]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Jcsg]]
+
</jmolCheckbox>
-
[[Category: Joint center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qiw ConSurf].
-
[[Category: Np_600288 1]]
+
<div style="clear:both"></div>
-
[[Category: Protein structure initiative]]
+
__TOC__
-
[[Category: Psi-2]]
+
</StructureSection>
-
[[Category: Putative pep phosphonomutase]]
+
[[Category: Corynebacterium glutamicum ATCC 13032]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:08:01 2008''
+

Current revision

Crystal structure of a putative phosphoenolpyruvate phosphonomutase (ncgl1015, cgl1060) from corynebacterium glutamicum atcc 13032 at 1.80 A resolution

PDB ID 2qiw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools