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2rd9

From Proteopedia

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[[Image:2rd9.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of a putative yfit-like metal-dependent hydrolase (bh0186) from bacillus halodurans c-125 at 2.30 A resolution==
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|PDB= 2rd9 |SIZE=350|CAPTION= <scene name='initialview01'>2rd9</scene>, resolution 2.300&Aring;
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<StructureSection load='2rd9' size='340' side='right'caption='[[2rd9]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>
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<table><tr><td colspan='2'>[[2rd9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RD9 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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|GENE= NP_241052.1, BH0186 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rd9 OCA], [https://pdbe.org/2rd9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rd9 RCSB], [https://www.ebi.ac.uk/pdbsum/2rd9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rd9 ProSAT], [https://www.topsan.org/Proteins/JCSG/2rd9 TOPSAN]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rd9 OCA], [http://www.ebi.ac.uk/pdbsum/2rd9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rd9 RCSB]</span>
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[https://www.uniprot.org/uniprot/Q9KGB8_HALH5 Q9KGB8_HALH5]
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Crystal structure of YfiT-like putative metal-dependent hydrolase (NP_241052.1) from Bacillus halodurans at 2.30 A resolution'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rd9_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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2RD9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RD9 OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Bacteria]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rd9 ConSurf].
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<div style="clear:both"></div>
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[[Category: jcsg]]
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__TOC__
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[[Category: joint center for structural genomic]]
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</StructureSection>
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[[Category: np_241052 1]]
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[[Category: Alkalihalobacillus halodurans C-125]]
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[[Category: protein structure initiative]]
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[[Category: Large Structures]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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[[Category: unknown function]]
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[[Category: yfit-like putative metal-dependent hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:59:03 2008''
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Current revision

Crystal structure of a putative yfit-like metal-dependent hydrolase (bh0186) from bacillus halodurans c-125 at 2.30 A resolution

PDB ID 2rd9

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