This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3b7f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:51, 25 January 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3b7f.png|left|200px]]
 
-
<!--
+
==Crystal structure of a putative glycosyl hydrolase with bnr repeats (reut_b4987) from ralstonia eutropha jmp134 at 2.20 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3b7f", creates the "Structure Box" on the page.
+
<StructureSection load='3b7f' size='340' side='right'caption='[[3b7f]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3b7f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B7F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B7F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b7f OCA], [https://pdbe.org/3b7f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b7f RCSB], [https://www.ebi.ac.uk/pdbsum/3b7f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b7f ProSAT], [https://www.topsan.org/Proteins/JCSG/3b7f TOPSAN]</span></td></tr>
-
{{STRUCTURE_3b7f| PDB=3b7f | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of domain of unknown function with a 7-Bladed Beta-Propeller fold (YP_299179.1) from Ralstonia eutropha JMP134 at 2.20 A resolution===
+
[https://www.uniprot.org/uniprot/Q46R99_CUPPJ Q46R99_CUPPJ]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3B7F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B7F OCA].
+
<jmolCheckbox>
-
[[Category: Ralstonia eutropha jmp134]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b7/3b7f_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Domain of unknown function with a 7-bladed beta-propeller fold]]
+
</jmolCheckbox>
-
[[Category: Hydrolase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b7f ConSurf].
-
[[Category: Jcsg]]
+
<div style="clear:both"></div>
-
[[Category: Joint center for structural genomic]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Cupriavidus pinatubonensis JMP134]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Yp_299179 1]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:24:11 2008''
+

Current revision

Crystal structure of a putative glycosyl hydrolase with bnr repeats (reut_b4987) from ralstonia eutropha jmp134 at 2.20 A resolution

PDB ID 3b7f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools