This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ohv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:27, 25 January 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
==Structure of a RNA-processing protein==
+
 
-
<StructureSection load='4ohv' size='340' side='right' caption='[[4ohv]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
==C. Elegans Clp1 bound to AMP-PNP, and Mg2+==
 +
<StructureSection load='4ohv' size='340' side='right'caption='[[4ohv]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ohv]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OHV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OHV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ohv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OHV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OHV FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2PE:NONAETHYLENE+GLYCOL'>2PE</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ohv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ohv OCA], [https://pdbe.org/4ohv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ohv RCSB], [https://www.ebi.ac.uk/pdbsum/4ohv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ohv ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ohw|4ohw]], [[4ohx|4ohx]], [[4ohy|4ohy]], [[4ohz|4ohz]], [[4oi0|4oi0]], [[4oi1|4oi1]], [[4oi2|4oi2]]</td></tr>
+
</table>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ohv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ohv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ohv RCSB], [http://www.ebi.ac.uk/pdbsum/4ohv PDBsum]</span></td></tr>
+
== Function ==
-
<table>
+
[https://www.uniprot.org/uniprot/CLP1_CAEEL CLP1_CAEEL] Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4ohv" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Clausen, T.]]
+
[[Category: Caenorhabditis elegans]]
-
[[Category: Dikfidan, A.]]
+
[[Category: Large Structures]]
-
[[Category: Loll, B.]]
+
[[Category: Clausen T]]
-
[[Category: Meinhart, A.]]
+
[[Category: Dikfidan A]]
-
[[Category: Zeymer, C.]]
+
[[Category: Loll B]]
-
[[Category: Polynucleotide kinase]]
+
[[Category: Meinhart A]]
-
[[Category: Rna binding protein]]
+
[[Category: Zeymer C]]

Current revision

C. Elegans Clp1 bound to AMP-PNP, and Mg2+

PDB ID 4ohv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools