4om4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4om4' size='340' side='right'caption='[[4om4]], [[Resolution|resolution]] 2.74&Aring;' scene=''>
<StructureSection load='4om4' size='340' side='right'caption='[[4om4]], [[Resolution|resolution]] 2.74&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4om4]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Naja_atra Naja atra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OM4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OM4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4om4]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Naja_atra Naja atra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OM4 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4om5|4om5]]</td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4om4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4om4 OCA], [https://pdbe.org/4om4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4om4 RCSB], [https://www.ebi.ac.uk/pdbsum/4om4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4om4 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4om4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4om4 OCA], [http://pdbe.org/4om4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4om4 RCSB], [http://www.ebi.ac.uk/pdbsum/4om4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4om4 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CTXA2_NAJAT CTXA2_NAJAT]] Basic protein that bind to cell membrane and depolarizes cardiomyocytes. It also shows lytic activities, but 2-fold less important than that of CTX-A4. It binds to the integrin alpha-V/beta-3 with a moderate affinity. It may interact with sulfatides in the cell membrane which induces pore formation and cell internalization and is responsible for cytotoxicity in cardiomyocytes. It also may target the mitochondrial membrane and induces mitochondrial swelling and fragmentation.<ref>PMID:9398182</ref>
+
[https://www.uniprot.org/uniprot/3SA2_NAJAT 3SA2_NAJAT] Basic protein that binds to cell membrane and depolarizes cardiomyocytes. It also shows lytic activities, but 2-fold less important than that of CTX-A4. It binds to the integrin alpha-V/beta-3 (ITGAV/ITGB3) with a moderate affinity. It may interact with sulfatides in the cell membrane which induces pore formation and cell internalization and is responsible for cytotoxicity in cardiomyocytes. It also may target the mitochondrial membrane and induce mitochondrial swelling and fragmentation.<ref>PMID:9398182</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Naja atra]]
[[Category: Naja atra]]
-
[[Category: Chang, C I]]
+
[[Category: Chang CI]]
-
[[Category: Lin, C C]]
+
[[Category: Lin CC]]
-
[[Category: Wu, W G]]
+
[[Category: Wu WG]]
-
[[Category: Endocytosis]]
+
-
[[Category: Five beta sheet]]
+
-
[[Category: Heparan sulfate]]
+
-
[[Category: Heparin]]
+
-
[[Category: Three functional loop]]
+
-
[[Category: Toxin]]
+

Revision as of 07:32, 25 January 2023

Crystal structure of CTX A2 from Taiwan Cobra (Naja naja atra)

PDB ID 4om4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools