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3c1l

From Proteopedia

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[[Image:3c1l.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 A resolution==
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|PDB= 3c1l |SIZE=350|CAPTION= <scene name='initialview01'>3c1l</scene>, resolution 2.000&Aring;
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<StructureSection load='3c1l' size='340' side='right'caption='[[3c1l]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Peg+Binding+Site+For+Residue+J+189'>AC1</scene>, <scene name='pdbsite=AC2:Peg+Binding+Site+For+Residue+I+188'>AC2</scene>, <scene name='pdbsite=AC3:Peg+Binding+Site+For+Residue+I+189'>AC3</scene>, <scene name='pdbsite=AC4:Peg+Binding+Site+For+Residue+G+188'>AC4</scene>, <scene name='pdbsite=AC5:Peg+Binding+Site+For+Residue+H+188'>AC5</scene>, <scene name='pdbsite=AC6:Peg+Binding+Site+For+Residue+J+190'>AC6</scene>, <scene name='pdbsite=AC7:Peg+Binding+Site+For+Residue+J+191'>AC7</scene>, <scene name='pdbsite=AC8:Peg+Binding+Site+For+Residue+H+189'>AC8</scene>, <scene name='pdbsite=AC9:Peg+Binding+Site+For+Residue+B+188'>AC9</scene>, <scene name='pdbsite=BC1:Peg+Binding+Site+For+Residue+C+188'>BC1</scene>, <scene name='pdbsite=BC2:Peg+Binding+Site+For+Residue+B+189'>BC2</scene>, <scene name='pdbsite=BC3:Peg+Binding+Site+For+Residue+E+188'>BC3</scene>, <scene name='pdbsite=BC4:Peg+Binding+Site+For+Residue+A+188'>BC4</scene>, <scene name='pdbsite=BC5:Peg+Binding+Site+For+Residue+A+189'>BC5</scene>, <scene name='pdbsite=BC6:Peg+Binding+Site+For+Residue+B+190'>BC6</scene>, <scene name='pdbsite=BC7:Peg+Binding+Site+For+Residue+C+189'>BC7</scene>, <scene name='pdbsite=BC8:Peg+Binding+Site+For+Residue+A+190'>BC8</scene>, <scene name='pdbsite=BC9:Peg+Binding+Site+For+Residue+E+189'>BC9</scene>, <scene name='pdbsite=CC1:Peg+Binding+Site+For+Residue+D+188'>CC1</scene>, <scene name='pdbsite=CC2:Peg+Binding+Site+For+Residue+B+191'>CC2</scene>, <scene name='pdbsite=CC3:Peg+Binding+Site+For+Residue+A+191'>CC3</scene>, <scene name='pdbsite=CC4:Peg+Binding+Site+For+Residue+D+189'>CC4</scene>, <scene name='pdbsite=CC5:Peg+Binding+Site+For+Residue+D+190'>CC5</scene> and <scene name='pdbsite=CC6:Peg+Binding+Site+For+Residue+I+190'>CC6</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> and <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>
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<table><tr><td colspan='2'>[[3c1l]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C1L FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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|GENE= NP_105057.1, mlr4105 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266835 Mesorhizobium loti MAFF303099])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c1l OCA], [https://pdbe.org/3c1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c1l RCSB], [https://www.ebi.ac.uk/pdbsum/3c1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c1l ProSAT], [https://www.topsan.org/Proteins/JCSG/3c1l TOPSAN]</span></td></tr>
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}}
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</table>
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== Function ==
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'''Crystal structure of putative antioxidant defense protein (NP_105057.1) from Mesorhizobium loti at 2.00 A resolution'''
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[https://www.uniprot.org/uniprot/Q98ES4_RHILO Q98ES4_RHILO] Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (By similarity).[SAAS:SAAS029032_004_020539]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3C1L is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti_maff303099 Mesorhizobium loti maff303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1L OCA].
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<jmolCheckbox>
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[[Category: Mesorhizobium loti maff303099]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/3c1l_consurf.spt"</scriptWhenChecked>
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[[Category: Single protein]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: CL]]
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</jmolCheckbox>
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[[Category: PEG]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c1l ConSurf].
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[[Category: jcsg]]
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<div style="clear:both"></div>
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[[Category: joint center for structural genomic]]
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__TOC__
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[[Category: np_105057 1]]
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</StructureSection>
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[[Category: protein structure initiative]]
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[[Category: Large Structures]]
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[[Category: psi-2]]
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[[Category: Mesorhizobium japonicum MAFF 303099]]
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[[Category: putative antioxidant defense protein]]
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[[Category: structural genomic]]
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[[Category: unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:02:13 2008''
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Current revision

Crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 A resolution

PDB ID 3c1l

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