This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cgg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px {{Structure |PDB= 3cgg |SIZE=350|CAPTION= <scene name='initialview01'>3cgg</scene>, resolution 2.000&Aring; |SITE= <scene name='pdbsite=AC1:Nhe+Binding+Site...)
Current revision (11:30, 1 February 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3cgg.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of TehB-like SAM-dependent methyltransferase (NP_600671.1) from Corynebacterium glutamicum ATCC 13032 Kitasato at 2.00 A resolution==
-
|PDB= 3cgg |SIZE=350|CAPTION= <scene name='initialview01'>3cgg</scene>, resolution 2.000&Aring;
+
<StructureSection load='3cgg' size='340' side='right'caption='[[3cgg]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Nhe+Binding+Site+For+Residue+A+195'>AC1</scene>, <scene name='pdbsite=AC2:Nhe+Binding+Site+For+Residue+A+196'>AC2</scene>, <scene name='pdbsite=AC3:Cit+Binding+Site+For+Residue+B+195'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+197'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+198'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+B+196'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+199'>AC7</scene>, <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+200'>AC8</scene>, <scene name='pdbsite=AC9:Edo+Binding+Site+For+Residue+B+197'>AC9</scene>, <scene name='pdbsite=BC1:Edo+Binding+Site+For+Residue+A+201'>BC1</scene> and <scene name='pdbsite=BC2:Edo+Binding+Site+For+Residue+B+198'>BC2</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> and <scene name='pdbligand=CIT:CITRIC ACID'>CIT</scene>
+
<table><tr><td colspan='2'>[[3cgg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CGG FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
-
|GENE= NP_600671.1, cg1645 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196627 Corynebacterium glutamicum ATCC 13032])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cgg OCA], [https://pdbe.org/3cgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cgg RCSB], [https://www.ebi.ac.uk/pdbsum/3cgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cgg ProSAT], [https://www.topsan.org/Proteins/JCSG/3cgg TOPSAN]</span></td></tr>
-
}}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8NQI0_CORGL Q8NQI0_CORGL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cg/3cgg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cgg ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of TehB-like SAM-dependent methyltransferase (NP_600671.1) from Corynebacterium glutamicum ATCC 13032 Kitasato at 2.00 A resolution'''
+
==See Also==
-
 
+
*[[SAM-dependent methyltrasferase 3D structures|SAM-dependent methyltrasferase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3CGG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum_atcc_13032 Corynebacterium glutamicum atcc 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CGG OCA].
+
[[Category: Corynebacterium glutamicum ATCC 13032]]
-
[[Category: Corynebacterium glutamicum atcc 13032]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
-
[[Category: CIT]]
+
-
[[Category: EDO]]
+
-
[[Category: NHE]]
+
-
[[Category: jcsg]]
+
-
[[Category: joint center for structural genomic]]
+
-
[[Category: methyltransferase domain]]
+
-
[[Category: np_600671 1]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tehb-like sam-dependent methyltransferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:04:01 2008''
+

Current revision

Crystal structure of TehB-like SAM-dependent methyltransferase (NP_600671.1) from Corynebacterium glutamicum ATCC 13032 Kitasato at 2.00 A resolution

PDB ID 3cgg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cgg"
Personal tools