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3clm

From Proteopedia

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(New page: 200px {{Structure |PDB= 3clm |SIZE=350|CAPTION= <scene name='initialview01'>3clm</scene>, resolution 1.140&Aring; |SITE= <scene name='pdbsite=AC1:Cl+Binding+Site+...)
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[[Image:3clm.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at 1.14 A resolution==
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|PDB= 3clm |SIZE=350|CAPTION= <scene name='initialview01'>3clm</scene>, resolution 1.140&Aring;
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<StructureSection load='3clm' size='340' side='right'caption='[[3clm]], [[Resolution|resolution]] 1.14&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Cl+Binding+Site+For+Residue+A+352'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+353'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+354'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+355'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+356'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+357'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+358'>AC7</scene>, <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+359'>AC8</scene>, <scene name='pdbsite=AC9:Edo+Binding+Site+For+Residue+A+360'>AC9</scene>, <scene name='pdbsite=BC1:Edo+Binding+Site+For+Residue+A+361'>BC1</scene>, <scene name='pdbsite=BC2:Edo+Binding+Site+For+Residue+A+362'>BC2</scene>, <scene name='pdbsite=BC3:Edo+Binding+Site+For+Residue+A+363'>BC3</scene> and <scene name='pdbsite=BC4:Edo+Binding+Site+For+Residue+A+364'>BC4</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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<table><tr><td colspan='2'>[[3clm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_FA_1090 Neisseria gonorrhoeae FA 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLM FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transaldolase Transaldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.2.1.2 2.2.1.2] </span>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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|GENE= YP_208650.1, tal, NGO1610 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242231 Neisseria gonorrhoeae FA 1090])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clm OCA], [https://pdbe.org/3clm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clm RCSB], [https://www.ebi.ac.uk/pdbsum/3clm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clm ProSAT], [https://www.topsan.org/Proteins/JCSG/3clm TOPSAN]</span></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00955 Transaldolase_like]</span>
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3clm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clm OCA], [http://www.ebi.ac.uk/pdbsum/3clm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3clm RCSB]</span>
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[https://www.uniprot.org/uniprot/TAL_NEIG1 TAL_NEIG1] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (By similarity).
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clm_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clm ConSurf].
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<div style="clear:both"></div>
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'''Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at 1.14 A resolution'''
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==See Also==
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*[[Transaldolase 3D structures|Transaldolase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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3CLM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLM OCA].
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[[Category: Large Structures]]
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[[Category: Neisseria gonorrhoeae fa 1090]]
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[[Category: Neisseria gonorrhoeae FA 1090]]
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[[Category: Single protein]]
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[[Category: Transaldolase]]
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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[[Category: cytoplasm]]
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[[Category: jcsg]]
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[[Category: joint center for structural genomic]]
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[[Category: lyase]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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[[Category: transaldolase]]
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[[Category: transferase]]
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[[Category: yp_208650 1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 2 12:00:25 2008''
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Current revision

Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at 1.14 A resolution

PDB ID 3clm

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