This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3eo7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:35, 1 February 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3eo7.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a putative nitroreductase (ava_2154) from anabaena variabilis atcc 29413 at 1.80 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3eo7", creates the "Structure Box" on the page.
+
<StructureSection load='3eo7' size='340' side='right'caption='[[3eo7]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichormus_variabilis_ATCC_29413 Trichormus variabilis ATCC 29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EO7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eo7 OCA], [https://pdbe.org/3eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/3eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eo7 ProSAT], [https://www.topsan.org/Proteins/JCSG/3eo7 TOPSAN]</span></td></tr>
-
{{STRUCTURE_3eo7| PDB=3eo7 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of Putative Nitroreductase (YP_322669.1) from ANABAENA VARIABILIS ATCC 29413 at 1.80 A resolution===
+
[https://www.uniprot.org/uniprot/Q3MB62_TRIV2 Q3MB62_TRIV2]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3EO7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Anabaena_variabilis_atcc_29413 Anabaena variabilis atcc 29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EO7 OCA].
+
<jmolCheckbox>
-
[[Category: Anabaena variabilis atcc 29413]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/3eo7_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Jcsg]]
+
</jmolCheckbox>
-
[[Category: Joint center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eo7 ConSurf].
-
[[Category: Oxidoreductase]]
+
<div style="clear:both"></div>
-
[[Category: Oxidoredutase]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Large Structures]]
-
[[Category: Putative nitroreductase]]
+
[[Category: Trichormus variabilis ATCC 29413]]
-
[[Category: Structural genomic]]
+
-
[[Category: Yp_322669 1]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 29 11:02:47 2008''
+

Current revision

Crystal structure of a putative nitroreductase (ava_2154) from anabaena variabilis atcc 29413 at 1.80 A resolution

PDB ID 3eo7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools