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3i4g

From Proteopedia

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{{Seed}}
 
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[[Image:3i4g.jpg|left|200px]]
 
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==CRYSTAL STRUCTURE OF A SUSD-LIKE CARBOHYDRATE BINDING PROTEIN (BF0978) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 1.35 A RESOLUTION==
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The line below this paragraph, containing "STRUCTURE_3i4g", creates the "Structure Box" on the page.
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<StructureSection load='3i4g' size='340' side='right'caption='[[3i4g]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3i4g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I4G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I4G FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i4g OCA], [https://pdbe.org/3i4g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i4g RCSB], [https://www.ebi.ac.uk/pdbsum/3i4g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i4g ProSAT], [https://www.topsan.org/Proteins/JCSG/3i4g TOPSAN]</span></td></tr>
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{{STRUCTURE_3i4g| PDB=3i4g | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of SusD-like carbohydrate binding protein BF1063 from Bacteroides fragilis YCH46 (YP_210668.1) from Bacteroides fragilis NCTC 9343 at 1.35 A resolution===
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[https://www.uniprot.org/uniprot/Q5LGM0_BACFN Q5LGM0_BACFN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3I4G is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I4G OCA].
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<jmolCheckbox>
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[[Category: Bacteroides fragilis nctc 9343]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i4/3i4g_consurf.spt"</scriptWhenChecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Jcsg]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Joint center for structural genomic]]
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</jmolCheckbox>
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[[Category: Protein structure initiative]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i4g ConSurf].
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[[Category: Psi-2]]
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<div style="clear:both"></div>
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[[Category: Structural genomic]]
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__TOC__
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[[Category: Sugar binding protein]]
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</StructureSection>
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[[Category: Susd-like carbohydrate binding protein bf1063 from bacteroides fragilis ych46]]
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[[Category: Bacteroides fragilis NCTC 9343]]
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[[Category: Yp_210668 1]]
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[[Category: Large Structures]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 22 20:47:58 2009''
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Current revision

CRYSTAL STRUCTURE OF A SUSD-LIKE CARBOHYDRATE BINDING PROTEIN (BF0978) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 1.35 A RESOLUTION

PDB ID 3i4g

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