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3iib

From Proteopedia

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{{Seed}}
 
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[[Image:3iib.png|left|200px]]
 
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==Crystal structure of Peptidase M28 precursor (YP_926796.1) from SHEWANELLA AMAZONENSIS SB2B at 1.70 A resolution==
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The line below this paragraph, containing "STRUCTURE_3iib", creates the "Structure Box" on the page.
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<StructureSection load='3iib' size='340' side='right'caption='[[3iib]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3iib]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_amazonensis_SB2B Shewanella amazonensis SB2B]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IIB FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iib OCA], [https://pdbe.org/3iib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iib RCSB], [https://www.ebi.ac.uk/pdbsum/3iib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iib ProSAT], [https://www.topsan.org/Proteins/JCSG/3iib TOPSAN]</span></td></tr>
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{{STRUCTURE_3iib| PDB=3iib | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of Peptidase M28 precursor (YP_926796.1) from SHEWANELLA AMAZONENSIS SB2B at 1.70 A resolution===
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[https://www.uniprot.org/uniprot/A1S420_SHEAM A1S420_SHEAM]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3IIB is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_amazonensis_sb2b Shewanella amazonensis sb2b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IIB OCA].
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<jmolCheckbox>
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[[Category: Shewanella amazonensis sb2b]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ii/3iib_consurf.spt"</scriptWhenChecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Hydrolase]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Jcsg]]
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</jmolCheckbox>
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[[Category: Joint center for structural genomic]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iib ConSurf].
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[[Category: Peptidase family m28]]
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<div style="clear:both"></div>
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[[Category: Peptidase m28 precursor]]
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__TOC__
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[[Category: Protein structure initiative]]
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</StructureSection>
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[[Category: Psi-2]]
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[[Category: Large Structures]]
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[[Category: Structural genomic]]
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[[Category: Shewanella amazonensis SB2B]]
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[[Category: Yp_926796 1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 17:22:54 2009''
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Current revision

Crystal structure of Peptidase M28 precursor (YP_926796.1) from SHEWANELLA AMAZONENSIS SB2B at 1.70 A resolution

PDB ID 3iib

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