This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3iup

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:41, 1 February 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='3iup' size='340' side='right'caption='[[3iup]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3iup' size='340' side='right'caption='[[3iup]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3iup]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupnj Cupnj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IUP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IUP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3iup]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IUP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IUP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iup OCA], [https://pdbe.org/3iup PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iup RCSB], [https://www.ebi.ac.uk/pdbsum/3iup PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iup ProSAT], [https://www.topsan.org/Proteins/JCSG/3iup TOPSAN]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Reut_A1899, YP_296108.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264198 CUPNJ])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iup OCA], [http://pdbe.org/3iup PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iup RCSB], [http://www.ebi.ac.uk/pdbsum/3iup PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iup ProSAT], [http://www.topsan.org/Proteins/JCSG/3iup TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q470B9_CUPPJ Q470B9_CUPPJ]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cupnj]]
+
[[Category: Cupriavidus pinatubonensis JMP134]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
 
-
[[Category: Jcsg]]
 
-
[[Category: Oxidoreductase]]
 
-
[[Category: PSI, Protein structure initiative]]
 
-
[[Category: Putative nadph:quinone oxidoreductase]]
 
-
[[Category: Yp_296108 1]]
 

Current revision

Crystal structure of Putative NADPH:quinone oxidoreductase (YP_296108.1) from RALSTONIA EUTROPHA JMP134 at 1.70 A resolution

PDB ID 3iup

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools