This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k2k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:43, 1 February 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3k2k.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of putative carboxypeptidase (YP_103406.1) from BURKHOLDERIA MALLEI ATCC 23344 at 2.49 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3k2k", creates the "Structure Box" on the page.
+
<StructureSection load='3k2k' size='340' side='right'caption='[[3k2k]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3k2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_mallei_ATCC_23344 Burkholderia mallei ATCC 23344]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K2K FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k2k OCA], [https://pdbe.org/3k2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k2k RCSB], [https://www.ebi.ac.uk/pdbsum/3k2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k2k ProSAT]</span></td></tr>
-
{{STRUCTURE_3k2k| PDB=3k2k | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of putative carboxypeptidase (YP_103406.1) from BURKHOLDERIA MALLEI ATCC 23344 at 2.49 A resolution===
+
[https://www.uniprot.org/uniprot/A0A0H2WJQ2_BURMA A0A0H2WJQ2_BURMA]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3K2K is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Burkholderia_mallei_atcc_23344 Burkholderia mallei atcc 23344]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K2K OCA].
+
<jmolCheckbox>
-
[[Category: Burkholderia mallei atcc 23344]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k2k_consurf.spt"</scriptWhenChecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Hydrolase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Jcsg]]
+
</jmolCheckbox>
-
[[Category: Joint center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k2k ConSurf].
-
[[Category: Protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: Psi-2]]
+
__TOC__
-
[[Category: Putative carboxypeptidase]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Burkholderia mallei ATCC 23344]]
-
 
+
[[Category: Large Structures]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 4 11:03:10 2009''
+

Current revision

Crystal structure of putative carboxypeptidase (YP_103406.1) from BURKHOLDERIA MALLEI ATCC 23344 at 2.49 A resolution

PDB ID 3k2k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k2k"
Personal tools