This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3l0a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:44, 1 February 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3l0a| PDB=3l0a | SCENE= }}
 
-
===Crystal structure of Putative exonuclease (RER070207002219) from Eubacterium rectale at 2.19 A resolution===
 
-
==About this Structure==
+
==Crystal structure of Putative exonuclease (RER070207002219) from Eubacterium rectale at 2.19 A resolution==
-
[[3l0a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0A OCA].
+
<StructureSection load='3l0a' size='340' side='right'caption='[[3l0a]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
-
[[Category: Eubacterium rectale]]
+
== Structural highlights ==
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<table><tr><td colspan='2'>[[3l0a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_rectale_ATCC_33656 Eubacterium rectale ATCC 33656]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L0A FirstGlance]. <br>
-
[[Category: Hydrolase]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Jcsg]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l0a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l0a OCA], [https://pdbe.org/3l0a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l0a RCSB], [https://www.ebi.ac.uk/pdbsum/3l0a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l0a ProSAT]</span></td></tr>
-
[[Category: Joint center for structural genomic]]
+
</table>
-
[[Category: Protein structure initiative]]
+
== Function ==
-
[[Category: Psi-2]]
+
[https://www.uniprot.org/uniprot/C4ZCC6_AGARV C4ZCC6_AGARV]
-
[[Category: Putative exonuclease]]
+
== Evolutionary Conservation ==
-
[[Category: Rer070207002219]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Structural genomic]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/3l0a_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l0a ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]

Current revision

Crystal structure of Putative exonuclease (RER070207002219) from Eubacterium rectale at 2.19 A resolution

PDB ID 3l0a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools