This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lza

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:45, 1 February 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lza.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of Putative SnoaL-like polyketide cyclase (YP_563807.1) from SHEWANELLA DENITRIFICANS OS-217 at 1.70 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3lza", creates the "Structure Box" on the page.
+
<StructureSection load='3lza' size='340' side='right'caption='[[3lza]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lza]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_denitrificans_OS217 Shewanella denitrificans OS217]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LZA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LZA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lza FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lza OCA], [https://pdbe.org/3lza PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lza RCSB], [https://www.ebi.ac.uk/pdbsum/3lza PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lza ProSAT]</span></td></tr>
-
{{STRUCTURE_3lza| PDB=3lza | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of Putative SnoaL-like polyketide cyclase (YP_563807.1) from SHEWANELLA DENITRIFICANS OS-217 at 1.70 A resolution===
+
[https://www.uniprot.org/uniprot/Q12KE2_SHEDO Q12KE2_SHEDO]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3LZA is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Shewanella_denitrificans Shewanella denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LZA OCA].
+
<jmolCheckbox>
-
[[Category: Shewanella denitrificans]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lz/3lza_consurf.spt"</scriptWhenChecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Jcsg]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joint center for structural genomic]]
+
</jmolCheckbox>
-
[[Category: Lyase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lza ConSurf].
-
[[Category: Protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: Psi-2]]
+
__TOC__
-
[[Category: Structural genomic]]
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:20:42 2010''
+
[[Category: Shewanella denitrificans OS217]]

Current revision

Crystal structure of Putative SnoaL-like polyketide cyclase (YP_563807.1) from SHEWANELLA DENITRIFICANS OS-217 at 1.70 A resolution

PDB ID 3lza

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools