This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3of4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:47, 1 February 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3of4.png|left|200px]]
 
-
{{STRUCTURE_3of4| PDB=3of4 | SCENE= }}
+
==Crystal structure of a FMN/FAD- and NAD(P)H-dependent nitroreductase (nfnB, IL2077) from Idiomarina loihiensis L2TR at 1.90 A resolution==
-
 
+
<StructureSection load='3of4' size='340' side='right'caption='[[3of4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===Crystal structure of a FMN/FAD- and NAD(P)H-dependent nitroreductase (nfnB, IL2077) from Idiomarina loihiensis L2TR at 1.90 A resolution===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3of4]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Idiomarina_loihiensis Idiomarina loihiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OF4 FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3of4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3of4 OCA], [https://pdbe.org/3of4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3of4 RCSB], [https://www.ebi.ac.uk/pdbsum/3of4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3of4 ProSAT]</span></td></tr>
-
[[3of4]] is a 3 chain structure of [[Nitroreductase]] with sequence from [http://en.wikipedia.org/wiki/Idiomarina_loihiensis Idiomarina loihiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OF4 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5R179_IDILO Q5R179_IDILO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/of/3of4_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3of4 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Nitroreductase|Nitroreductase]]
*[[Nitroreductase|Nitroreductase]]
 +
__TOC__
 +
</StructureSection>
[[Category: Idiomarina loihiensis]]
[[Category: Idiomarina loihiensis]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Jcsg]]
+
-
[[Category: Joint center for structural genomic]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of a FMN/FAD- and NAD(P)H-dependent nitroreductase (nfnB, IL2077) from Idiomarina loihiensis L2TR at 1.90 A resolution

PDB ID 3of4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools