This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ppb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ppb" [edit=sysop:move=sysop])
Current revision (11:49, 1 February 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ppb.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a putative tetR family transcription regulator (Shew_3104) from SHEWANELLA SP. PV-4 at 2.10 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3ppb", creates the "Structure Box" on the page.
+
<StructureSection load='3ppb' size='340' side='right'caption='[[3ppb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ppb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_loihica_PV-4 Shewanella loihica PV-4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PPB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PPB FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ppb OCA], [https://pdbe.org/3ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ppb RCSB], [https://www.ebi.ac.uk/pdbsum/3ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ppb ProSAT]</span></td></tr>
-
{{STRUCTURE_3ppb| PDB=3ppb | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of a putative tetR family transcription regulator (Shew_3104) from SHEWANELLA SP. PV-4 at 2.10 A resolution===
+
[https://www.uniprot.org/uniprot/A3QHM2_SHELP A3QHM2_SHELP]
-
 
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[3ppb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shewanella_loihica Shewanella loihica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PPB OCA].
+
[[Category: Shewanella loihica PV-4]]
-
[[Category: Shewanella loihica]]
+
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Dna/rna-binding 3-helical bundle fold]]
+
-
[[Category: Helix-turn-helix motif]]
+
-
[[Category: Hth motif]]
+
-
[[Category: Jcsg]]
+
-
[[Category: Joint center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tetracyclin repressor-like fold]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+

Current revision

Crystal structure of a putative tetR family transcription regulator (Shew_3104) from SHEWANELLA SP. PV-4 at 2.10 A resolution

PDB ID 3ppb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools