This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4pym

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4pym' size='340' side='right'caption='[[4pym]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
<StructureSection load='4pym' size='340' side='right'caption='[[4pym]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4pym]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PYM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PYM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4pym]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PYM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4p7k|4p7k]], [[4p7f|4p7f]], [[4p7g|4p7g]], [[4p7j|4p7j]], [[4pyi|4pyi]], [[4pyj|4pyj]], [[4pyk|4pyk]], [[4pyl|4pyl]], [[4pyn|4pyn]], [[4pyo|4pyo]], [[4pyq|4pyq]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pym OCA], [https://pdbe.org/4pym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pym RCSB], [https://www.ebi.ac.uk/pdbsum/4pym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pym ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Comt ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_O-methyltransferase Catechol O-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.6 2.1.1.6] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pym OCA], [http://pdbe.org/4pym PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pym RCSB], [http://www.ebi.ac.uk/pdbsum/4pym PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pym ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/COMT_RAT COMT_RAT]] Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. Also shortens the biological half-lives of certain neuroactive drugs, like L-DOPA, alpha-methyl DOPA and isoproterenol.
+
[https://www.uniprot.org/uniprot/COMT_RAT COMT_RAT] Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. Also shortens the biological half-lives of certain neuroactive drugs, like L-DOPA, alpha-methyl DOPA and isoproterenol.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 20:
==See Also==
==See Also==
-
*[[Catechol O-methyltransferase|Catechol O-methyltransferase]]
+
*[[Catechol O-methyltransferase 3D structures|Catechol O-methyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
 
-
[[Category: Catechol O-methyltransferase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Benz, J]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Ehler, A]]
+
[[Category: Benz J]]
-
[[Category: Rudolph, M G]]
+
[[Category: Ehler A]]
-
[[Category: Schlatter, D]]
+
[[Category: Rudolph MG]]
-
[[Category: Alternative initiation]]
+
[[Category: Schlatter D]]
-
[[Category: Catecholamine metabolism]]
+
-
[[Category: Cell membrane]]
+
-
[[Category: Conformational change]]
+
-
[[Category: Enzyme mechanism]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Methyltransferase]]
+
-
[[Category: Neurotransmitter degradation]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Signal-anchor]]
+
-
[[Category: Transferase]]
+
-
[[Category: Transmembrane anchor]]
+

Revision as of 07:37, 8 February 2023

humanized rat apo-COMT bound to sulphate

PDB ID 4pym

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools