This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4qdo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:24, 15 February 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Ag85C co-crystallized with p-chloromercuribenzoic acid==
==Crystal structure of Ag85C co-crystallized with p-chloromercuribenzoic acid==
-
<StructureSection load='4qdo' size='340' side='right' caption='[[4qdo]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4qdo' size='340' side='right'caption='[[4qdo]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4qdo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QDO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QDO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4qdo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QDO FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=31Q:(4-CARBOXYPHENYL)(L-CYSTEINATO-KAPPAS~3~)MERCURY'>31Q</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=31Q:(4-CARBOXYPHENYL)(L-CYSTEINATO-KAPPAS~3~)MERCURY'>31Q</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qdo OCA], [https://pdbe.org/4qdo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qdo RCSB], [https://www.ebi.ac.uk/pdbsum/4qdo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qdo ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4qdt|4qdt]], [[4qdu|4qdu]], [[4qdx|4qdx]], [[4qdz|4qdz]], [[4qe3|4qe3]], [[4qek|4qek]]</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qdo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qdo RCSB], [http://www.ebi.ac.uk/pdbsum/4qdo PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A85C_MYCTU A85C_MYCTU] The antigen 85 proteins (FbpA, FbpB, FbpC) are responsible for the high affinity of mycobacteria to fibronectin, a large adhesive glycoprotein, which facilitates the attachment of M.tuberculosis to murine alveolar macrophages (AMs). They also help to maintain the integrity of the cell wall by catalyzing the transfer of mycolic acids to cell wall arabinogalactan and through the synthesis of alpha,alpha-trehalose dimycolate (TDM, cord factor). They catalyze the transfer of a mycoloyl residue from one molecule of alpha,alpha-trehalose monomycolate (TMM) to another TMM, leading to the formation of TDM.<ref>PMID:1830294</ref> <ref>PMID:9162010</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4qdo" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Antigen 85 3D structures|Antigen 85 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Favrot, L.]]
+
[[Category: Large Structures]]
-
[[Category: Lajiness, D H.]]
+
[[Category: Mycobacterium tuberculosis H37Rv]]
-
[[Category: Ronning, D R.]]
+
[[Category: Favrot L]]
-
[[Category: Diacylglycerol acyltransferase]]
+
[[Category: Lajiness DH]]
-
[[Category: Mycolyltransferase]]
+
[[Category: Ronning DR]]
-
[[Category: Transferase]]
+

Current revision

Crystal structure of Ag85C co-crystallized with p-chloromercuribenzoic acid

PDB ID 4qdo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools