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6g5z

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<StructureSection load='6g5z' size='340' side='right'caption='[[6g5z]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
<StructureSection load='6g5z' size='340' side='right'caption='[[6g5z]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6g5z]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_9930 Atcc 9930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G5Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G5Z FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6g5z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinorhizobium_meliloti Sinorhizobium meliloti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G5Z FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DDZ:3,3-DIHYDROXY+L-ALANINE'>DDZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DDZ:3,3-DIHYDROXY+L-ALANINE'>DDZ</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g5z OCA], [https://pdbe.org/6g5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g5z RCSB], [https://www.ebi.ac.uk/pdbsum/6g5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g5z ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Choline-sulfatase Choline-sulfatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.6.6 3.1.6.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g5z OCA], [http://pdbe.org/6g5z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g5z RCSB], [http://www.ebi.ac.uk/pdbsum/6g5z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g5z ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/BETC_RHIME BETC_RHIME] Converts choline-O-sulfate into choline.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Choline-O-sulfatase (COSe; EC 3.1.6.6) is a member of the alkaline phosphatase (AP) superfamily, and its natural function is to hydrolyze choline-O-sulfate into choline and sulfate. Despite its natural function, the major interest in this enzyme resides in the landmark catalytic/substrate promiscuity of sulfatases, which has led to attention in the biotechnological field due to their potential in protein engineering. In this work, an in-depth structural analysis of wild-type Sinorhizobium (Ensifer) meliloti COSe (SmeCOSe) and its C54S active-site mutant is reported. The binding mode of this AP superfamily member to both products of the reaction (sulfate and choline) and to a substrate-like compound are shown for the first time. The structures further confirm the importance of the C-terminal extension of the enzyme in becoming part of the active site and participating in enzyme activity through dynamic intra-subunit and inter-subunit hydrogen bonds (Asn146(A)-Asp500(B)-Asn498(B)). These residues act as the `gatekeeper' responsible for the open/closed conformations of the enzyme, in addition to assisting in ligand binding through the rearrangement of Leu499 (with a movement of approximately 5 A). Trp129 and His145 clamp the quaternary ammonium moiety of choline and also connect the catalytic cleft to the C-terminus of an adjacent protomer. The structural information reported here contrasts with the proposed role of conformational dynamics in promoting the enzymatic catalytic proficiency of an enzyme.
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Structural insights into choline-O-sulfatase reveal the molecular determinants for ligand binding.,Gavira JA, Camara-Artigas A, Neira JL, Torres de Pinedo JM, Sanchez P, Ortega E, Martinez-Rodriguez S Acta Crystallogr D Struct Biol. 2022 May 1;78(Pt 5):669-682. doi:, 10.1107/S2059798322003709. Epub 2022 Apr 26. PMID:35503214<ref>PMID:35503214</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6g5z" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Sulfatase 3D structures|Sulfatase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 9930]]
 
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[[Category: Choline-sulfatase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Camara-Artigas, A]]
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[[Category: Sinorhizobium meliloti]]
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[[Category: Martinez-Rodriguez, S]]
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[[Category: Camara-Artigas A]]
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[[Category: Hydrolase]]
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[[Category: Martinez-Rodriguez S]]

Revision as of 07:40, 8 March 2023

Choline sulfatase from Ensifer (Sinorhizobium) meliloti

PDB ID 6g5z

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